PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022975972.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | NAC | ||||||||
Protein Properties | Length: 280aa MW: 30970.9 Da PI: 5.5895 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 78.5 | 1.5e-24 | 16 | 156 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.....lelee.......vikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknra 77 l pG+ F+P+de+++++yL +k++++ + ik++d ++++P dLp ++++k+wy++s + +++ r + XP_022975972.1 16 LLPGCCFSPSDEQILCFYLPNKTTASIspnslA---NgvspgynLIKDLDPFDYDPFDLPDsacfsyGSRGRKKHWYYYSVSVFSEE---RGRIR 104 579*******************88877554440...255556548**************944777654445778******9987654...44445 PP NAM 78 tksgyWkatgkdkevlskkgelvglkktLvfykg.rapkgektdWvmheyrl 128 +ksgyW+ + + +e + ++g + g+k+++vfy g + ++++kt+W+m ey+l XP_022975972.1 105 MKSGYWRRKRRAREAIIHRGVVLGMKTSFVFYWGnSIENAVKTNWIMYEYAL 156 789****99999988888**************774778999*********87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 280 aa Download sequence |
MEVLQPFQPA SSSSCLLPGC CFSPSDEQIL CFYLPNKTTA SISPNSLANG VSPGYNLIKD 60 LDPFDYDPFD LPDSACFSYG SRGRKKHWYY YSVSVFSEER GRIRMKSGYW RRKRRAREAI 120 IHRGVVLGMK TSFVFYWGNS IENAVKTNWI MYEYALGDHF KASFVLHRVF FRGWGHGISG 180 NGLSAYGDGS VSAVCHNGNQ EDGIPVTNGI AGHEMGCAEK PNCVLVTDPV TTLQVPSEAY 240 PCGMMAPSPV TPTGSISILD GDFIELNDLD DQLDPEDISR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G10490.2 | 8e-12 | NAC family protein |