PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022975948.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Nin-like

Protein Properties

Length: 915aa MW: 102184 Da PI: 6.6306

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022975948.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	91.7	5.6e-29	594	643	3	52
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 k+i+l++l++yF++++kdAAk++gvc+T+LKriCRq+GIkRWP+Rkik++ XP_022975948.1 594 KTITLQVLRQYFAGSLKDAAKSIGVCPTTLKRICRQHGIKRWPSRKIKKV 643 89**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 915 aa Download sequence
MEDCMLSPAT MLDAPAEAAM DLDYMDGLLL EGCWLETAEG TEFLHPSTAS FGANLDPLIA 60 WPTTDMNGDF HMSQITRTNH EEPRRILTDE ASMGRGRVDM EQEGCSGQSE NHGFEGSELC 120 RRLWIGPGDH LGSASSVMEK LIRAVGYIKD FVRDKDVLVQ VWVPINRGGR NVLITNDLPF 180 SQNSSCTRLT KYRDVSVKYE FTADDDSKNA LGLPGRVFSR KVPEWTPDVR FFRSDEYPRV 240 NHAHEHDVRG TVALPIFEQG SKNCLGVIEV VMVTQQIKYG SELESVCKAL EAVKLRSSDV 300 IGHPDKKQVF NRSNEAVLQE IQNTLKSACE THGLPLAQTW ASCIQQNREG CRHSDENYSC 360 CVSTVDRACF VADPRVQEFH EACSEHHLLK GEGIVGMAFK SNEPCFSSDI TSFCNTEYPL 420 SHHAKLFRLH AAVAIRLRCI YNSKTDFVLE FFLPVDCRDP EEQRVLLTSL STIIQRSCRS 480 LRLVNDKECR EENMQQSCRR SKVEHQQLEM SHPTNSLLTS SVQNIQQQSG FVSLFQDGKT 540 SEILSSSGYQ HHELNYNLNG VVEDSEECAT VGNSCFSDTG LGRTGEKRRT KVDKTITLQV 600 LRQYFAGSLK DAAKSIGVCP TTLKRICRQH GIKRWPSRKI KKVGHSLQKL QLVIDSVEGA 660 SGAFQIGSLY SNFQDLASPN LSGSGPVLSA KMGDCMKTSS NPNEVGMSNL QGGGASKSPS 720 SSCSQSSSSN QCFSSRSHRS VGHWNKGGSE DQMGGGENPC DGELKRVKSE VEIHVSIMEG 780 SNIPRRSQSC KSLCKHPATE CLVHSANEGD GMAERVEVQK VKVSYGEEKI RFRVHNQWRY 840 EELLNEVGKR FSISDMSKFD LKYLDDESEW VLLTSDTDLE ECFHVYKSCR IQTIRLSVQE 900 SRRHKRNCVV SGGFS

Sequence ? help Back to Top

Protein Sequence Length: 915 aa Download sequence

MEDCMLSPAT MLDAPAEAAM DLDYMDGLLL EGCWLETAEG TEFLHPSTAS FGANLDPLIA  60
WPTTDMNGDF HMSQITRTNH EEPRRILTDE ASMGRGRVDM EQEGCSGQSE NHGFEGSELC  120
RRLWIGPGDH LGSASSVMEK LIRAVGYIKD FVRDKDVLVQ VWVPINRGGR NVLITNDLPF  180
SQNSSCTRLT KYRDVSVKYE FTADDDSKNA LGLPGRVFSR KVPEWTPDVR FFRSDEYPRV  240
NHAHEHDVRG TVALPIFEQG SKNCLGVIEV VMVTQQIKYG SELESVCKAL EAVKLRSSDV  300
IGHPDKKQVF NRSNEAVLQE IQNTLKSACE THGLPLAQTW ASCIQQNREG CRHSDENYSC  360
CVSTVDRACF VADPRVQEFH EACSEHHLLK GEGIVGMAFK SNEPCFSSDI TSFCNTEYPL  420
SHHAKLFRLH AAVAIRLRCI YNSKTDFVLE FFLPVDCRDP EEQRVLLTSL STIIQRSCRS  480
LRLVNDKECR EENMQQSCRR SKVEHQQLEM SHPTNSLLTS SVQNIQQQSG FVSLFQDGKT  540
SEILSSSGYQ HHELNYNLNG VVEDSEECAT VGNSCFSDTG LGRTGEKRRT KVDKTITLQV  600
LRQYFAGSLK DAAKSIGVCP TTLKRICRQH GIKRWPSRKI KKVGHSLQKL QLVIDSVEGA  660
SGAFQIGSLY SNFQDLASPN LSGSGPVLSA KMGDCMKTSS NPNEVGMSNL QGGGASKSPS  720
SSCSQSSSSN QCFSSRSHRS VGHWNKGGSE DQMGGGENPC DGELKRVKSE VEIHVSIMEG  780
SNIPRRSQSC KSLCKHPATE CLVHSANEGD GMAERVEVQK VKVSYGEEKI RFRVHNQWRY  840
EELLNEVGKR FSISDMSKFD LKYLDDESEW VLLTSDTDLE ECFHVYKSCR IQTIRLSVQE  900
SRRHKRNCVV SGGFS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G20640.2	0.0	Nin-like family protein