PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022975126.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

CPP

Protein Properties

Length: 788aa MW: 85714.4 Da PI: 5.7101

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022975126.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	50.7	3.4e-16	490	528	2	40
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+CnCkkskClk+YCeCfaag++C e C+C+dC+Nk XP_022975126.1 490 SCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCQDCFNKP 528 689**********************************96 PP
2	TCR	50.5	4e-16	575	613	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkks+ClkkYCeC++ g+ Cs +C+Ce+CkN XP_022975126.1 575 RHKRGCNCKKSSCLKKYCECYQGGVGCSISCRCEGCKNA 613 589***********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 788 aa Download sequence
MDTPERKQIA TTSVSKFEDS PVFNYINNLS PIQPVKSIHT TQTFNSLSFA SLPSVFTSPH 60 VSSYKESRFL RRHSVADLSK PDFASENGNK VDTNGGVTGS VSQLQENSSA PDGNSDSLSN 120 PTKLPSVHPL STKEEPQAMK SDSARPDCDQ KLPDSVTESG EDPALIEPYV HNKSGNGSAE 180 AEANKQVVSL TEEREATGYD WESLITEGSD LLIFSSPNGS EAIRLVQKPL DLVTGFTSST 240 LSQIMENDNT NLSKMRIADP IESSGGQQEI EFLSSQAGEA RELKDMDRAI DSLSFPNSSN 300 SMSREITDDE VARYITDDCK PVSNLYRGMR RRCLDFEAAV SRRKNLEDGS TSGSVSTHPE 360 EKMPSVDKQL VPYKTGGVAS RCILTGIGLH LNALATASKD AKTLNQEKFS SEKQLNLPNS 420 SASCHSPSTG LDPRLTSVVT ERDMDPSENG VHNEEDAVRA SAYVLAEDFN QNSPKKKRRR 480 LEHAGETESS CKRCNCKKSK CLKLYCECFA AGVYCIEPCS CQDCFNKPIH EDTVLATRKQ 540 IESRNPLAFA PKVIRNSDSL PEPGDESNKT PASARHKRGC NCKKSSCLKK YCECYQGGVG 600 CSISCRCEGC KNAFGRKDGS SLLGLETEQE EEEPETNQAS AMDDKALHGP EIPNNEEQNP 660 GSAIPSTPLQ HCRQLVPLPF SSRSKPLRSS FLNVGSSSGF YTGNKLEKPN ILQSQPDPGK 720 NTLPGMEDEM PDILCGNCSP GAGVKTGSPN SKRISPPQSD FGLSPLPRTG RKLILQSIPS 780 FPSLTPQH

Sequence ? help Back to Top

Protein Sequence Length: 788 aa Download sequence

MDTPERKQIA TTSVSKFEDS PVFNYINNLS PIQPVKSIHT TQTFNSLSFA SLPSVFTSPH  60
VSSYKESRFL RRHSVADLSK PDFASENGNK VDTNGGVTGS VSQLQENSSA PDGNSDSLSN  120
PTKLPSVHPL STKEEPQAMK SDSARPDCDQ KLPDSVTESG EDPALIEPYV HNKSGNGSAE  180
AEANKQVVSL TEEREATGYD WESLITEGSD LLIFSSPNGS EAIRLVQKPL DLVTGFTSST  240
LSQIMENDNT NLSKMRIADP IESSGGQQEI EFLSSQAGEA RELKDMDRAI DSLSFPNSSN  300
SMSREITDDE VARYITDDCK PVSNLYRGMR RRCLDFEAAV SRRKNLEDGS TSGSVSTHPE  360
EKMPSVDKQL VPYKTGGVAS RCILTGIGLH LNALATASKD AKTLNQEKFS SEKQLNLPNS  420
SASCHSPSTG LDPRLTSVVT ERDMDPSENG VHNEEDAVRA SAYVLAEDFN QNSPKKKRRR  480
LEHAGETESS CKRCNCKKSK CLKLYCECFA AGVYCIEPCS CQDCFNKPIH EDTVLATRKQ  540
IESRNPLAFA PKVIRNSDSL PEPGDESNKT PASARHKRGC NCKKSSCLKK YCECYQGGVG  600
CSISCRCEGC KNAFGRKDGS SLLGLETEQE EEEPETNQAS AMDDKALHGP EIPNNEEQNP  660
GSAIPSTPLQ HCRQLVPLPF SSRSKPLRSS FLNVGSSSGF YTGNKLEKPN ILQSQPDPGK  720
NTLPGMEDEM PDILCGNCSP GAGVKTGSPN SKRISPPQSD FGLSPLPRTG RKLILQSIPS  780
FPSLTPQH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	474	481	PKKKRRRL
2	475	480	KKKRRR
3	477	481	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22780.1	1e-107	CPP family protein