PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022974802.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

GeBP

Protein Properties

Length: 391aa MW: 43713.6 Da PI: 4.5995

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022974802.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	118.2	4.6e-37	110	208	1	97
DUF573 1 klfqrlwseeDeivlLqGlidfkaktgk.spsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelsk 93 klfqrlw++eDei lLqG++d+++++g+ + ++ d+ fy+++k++++++++k+qlveK+rrLKkK+++ k++sgke++f+++hdq +fe+s+ XP_022974802.1 110 KLFQRLWTDEDEIELLQGFLDYTMQRGTtHHHQnDTALFYDQIKSKLQLDFNKNQLVEKLRRLKKKYRNVIGKISSGKEFNFKSPHDQATFEISR 204 579***********************633446********************************************************* PP DUF573 94 kiWg 97 kiW XP_022974802.1 205 KIWS 208 *6 PP

Sequence ? help Back to Top
Protein Sequence Length: 391 aa Download sequence
MDPRNDAVFP DEDLEDDEES LEDDDDDEEE ELNDDPSPST SSAGAVAVPS VSAVVTIATP 60 GTIDRPVPVV PPPSIVSISS SDLIRQRLET ASAEPLTLQC EKKPLDESRK LFQRLWTDED 120 EIELLQGFLD YTMQRGTTHH HQNDTALFYD QIKSKLQLDF NKNQLVEKLR RLKKKYRNVI 180 GKISSGKEFN FKSPHDQATF EISRKIWSNT GRIGVDDNAL DDEEPAPTPY ASYMDARNEE 240 MMANFSEKKP TPIPKSRKRS RPGSGLRMDG PPRSSNELNK EKNSTYNNNN NNENVNHVGV 300 GGLIEETVRS CLSPLFKELL SNSMGGGGLC GSRGFSGLAL HPIPLSFGGG DMADERWRKQ 360 QIMELEVYSK RLELVQEQIK TALEDLRSMG G

Sequence ? help Back to Top

Protein Sequence Length: 391 aa Download sequence

MDPRNDAVFP DEDLEDDEES LEDDDDDEEE ELNDDPSPST SSAGAVAVPS VSAVVTIATP  60
GTIDRPVPVV PPPSIVSISS SDLIRQRLET ASAEPLTLQC EKKPLDESRK LFQRLWTDED  120
EIELLQGFLD YTMQRGTTHH HQNDTALFYD QIKSKLQLDF NKNQLVEKLR RLKKKYRNVI  180
GKISSGKEFN FKSPHDQATF EISRKIWSNT GRIGVDDNAL DDEEPAPTPY ASYMDARNEE  240
MMANFSEKKP TPIPKSRKRS RPGSGLRMDG PPRSSNELNK EKNSTYNNNN NNENVNHVGV  300
GGLIEETVRS CLSPLFKELL SNSMGGGGLC GSRGFSGLAL HPIPLSFGGG DMADERWRKQ  360
QIMELEVYSK RLELVQEQIK TALEDLRSMG G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28040.1	1e-77	GeBP family protein