PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022974786.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 241aa MW: 27738.8 Da PI: 9.4511 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 92.4 | 2.2e-29 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien +nrqvt+skRrng++KKA+EL vLCda+v++i+fsstgkl+ey+s XP_022974786.1 9 KRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYIS 59 79***********************************************86 PP | |||||||
2 | K-box | 90.3 | 3.5e-30 | 71 | 169 | 1 | 99 |
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 yqk+ g++l+ ++++++q++l+kLk+ +++L+r++ +++Ge++++Ls++eL+ Leq+++++++ iR++K++++ +qie+ +kk k++ e++k+L XP_022974786.1 71 YQKTLGVDLWISHYQRMQENLKKLKDVNRSLRRQIMQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKYRVISNQIETHKKKLKSVGEIHKSLL 165 7899999***************************************************************************************9 PP K-box 96 kkle 99 ++++ XP_022974786.1 166 QEFD 169 9975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence |
MARGKIQIKR IENPTNRQVT YSKRRNGLFK KANELTVLCD AKVSIIMFSS TGKLHEYISP 60 STSTKELFDQ YQKTLGVDLW ISHYQRMQEN LKKLKDVNRS LRRQIMQRMG ECMNDLSFEE 120 LRCLEQDMDN AVRIIRERKY RVISNQIETH KKKLKSVGEI HKSLLQEFDI ATEEDPHYGL 180 VDNGGVGVGV GVGGGDYESI MGYHPGGAHP RIFNLRLQPN HPNIHLQHPP PPDLTTYPLL 240 E |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54340.1 | 8e-89 | MIKC_MADS family protein |