PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022974754.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HSF

Protein Properties

Length: 469aa MW: 52413.1 Da PI: 6.7248

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022974754.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	106.5	2.1e-33	18	108	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl k+y+++++++++e++sw+++++sfvv+++ efa+ +Lp++Fkh+nf+SF+RQLn+YgFkk+++e+ weF+++ F k++k+ll++ XP_022974754.1 18 FLIKTYDMVDESATDEIVSWTSSKKSFVVWNPPEFARLLLPTFFKHNNFSSFIRQLNTYGFKKIDSER---------WEFANDDFIKDQKHLLKN 103 9**************************************************************999.........************** PP XXXXX CS HSF_DNA-bind 97 ikrkk 101 i+r+k XP_022974754.1 104 IHRRK 108 *98 PP

Sequence ? help Back to Top
Protein Sequence Length: 469 aa Download sequence
MEAAAGGGGT GGAGPAPFLI KTYDMVDESA TDEIVSWTSS KKSFVVWNPP EFARLLLPTF 60 FKHNNFSSFI RQLNTYGFKK IDSERWEFAN DDFIKDQKHL LKNIHRRKPI HSHSTPPGSL 120 VDPERAAFED EIDRLSRKKT TLEADISRFK QQKSTAKIQL QDLTVKVESM EKRQKNLLAF 180 LEKAVQNPSF VEHLARRVES MDFTAFNKKR RLPSGDHSQP AIENSFLDNH SSSRSESGNI 240 FHQDFSHKMR LETSSVSDIN LLSCSTQSSN EGGGSSQRNM SKLDTRGVQE SHHFAAETLD 300 LSDTGTSFVL KRDSSLSGKS PNDESPCLHS LQPNVSSKED GENHISCHLN LTLASSSLQV 360 NDADYSVRMP QLGQNLRKSS GSKVSNGKES DMRLFTKNIN LDEGTSTFCL KETSSNNHGP 420 PANPVRVNDV FWEQFLTERP GCPESEEASS NYRENLYKEP DDGRSGLSL

Sequence ? help Back to Top

Protein Sequence Length: 469 aa Download sequence

MEAAAGGGGT GGAGPAPFLI KTYDMVDESA TDEIVSWTSS KKSFVVWNPP EFARLLLPTF  60
FKHNNFSSFI RQLNTYGFKK IDSERWEFAN DDFIKDQKHL LKNIHRRKPI HSHSTPPGSL  120
VDPERAAFED EIDRLSRKKT TLEADISRFK QQKSTAKIQL QDLTVKVESM EKRQKNLLAF  180
LEKAVQNPSF VEHLARRVES MDFTAFNKKR RLPSGDHSQP AIENSFLDNH SSSRSESGNI  240
FHQDFSHKMR LETSSVSDIN LLSCSTQSSN EGGGSSQRNM SKLDTRGVQE SHHFAAETLD  300
LSDTGTSFVL KRDSSLSGKS PNDESPCLHS LQPNVSSKED GENHISCHLN LTLASSSLQV  360
NDADYSVRMP QLGQNLRKSS GSKVSNGKES DMRLFTKNIN LDEGTSTFCL KETSSNNHGP  420
PANPVRVNDV FWEQFLTERP GCPESEEASS NYRENLYKEP DDGRSGLSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13980.1	1e-144	HSF family protein