PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022974303.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 506aa MW: 57250.3 Da PI: 7.1546

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022974303.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	158.9	2e-49	13	142	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lp+GfrFhPtdeel+++yLk+k+ g++ + + i++vdi+k+ePwdLp + +++e+ew+fF+ +d ky++++r+nratk+gyWk+tgkd+++l XP_022974303.1 13 LPVGFRFHPTDEELINHYLKNKMLGRESLV-DYIRQVDICKYEPWDLPFlsNDHTSEQEWFFFAAQDLKYSNSRRSNRATKTGYWKSTGKDRKIL 106 79***********************777.99***********4334445778********************************* PP NAM 94 sk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 + +++l+g+kktLvfy+gr ++g +t+Wv+hey+l XP_022974303.1 107 APrTKKLIGTKKTLVFYSGRVSNGIRTNWVIHEYHL 142 9867788**************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 506 aa Download sequence
MADCIVLPSG DLLPVGFRFH PTDEELINHY LKNKMLGRES LVDYIRQVDI CKYEPWDLPF 60 LSNDHTSEQE WFFFAAQDLK YSNSRRSNRA TKTGYWKSTG KDRKILAPRT KKLIGTKKTL 120 VFYSGRVSNG IRTNWVIHEY HLHSDPQFAQ LRPFVICLLK KKLDENDVLI CDEAEQNGLM 180 NLTFDNEVSV NQNKEIPGNG QSLFPPNLQV SGYDFSQLES LLFCDREPIS MDFQANNSYG 240 TPVDRPTDEE IDIEEIYLHE GTPNSSTSGF NWKELLEKVD LDQGGALKGD TGMYATLNLQ 300 GNSTSHSMFD EHSSRVPTQT TPIIKESRRS PLTSKIFKYG GEEDLSSVRP RGDELQTNGI 360 SYLSDDSDRE TITLRFQSQP RSDKVVNHAK DSQNVQWKRK TQLQVVSSPD KAKAVSKWKK 420 VDGAAATSNK DIVVDRETEV KSRVAHQSNS TGRGSVESRG KRCSSILTTK CIHHRSSSAS 480 AYVARVCIGL ILFFVVARDM LLDGNW

Sequence ? help Back to Top

Protein Sequence Length: 506 aa Download sequence

MADCIVLPSG DLLPVGFRFH PTDEELINHY LKNKMLGRES LVDYIRQVDI CKYEPWDLPF  60
LSNDHTSEQE WFFFAAQDLK YSNSRRSNRA TKTGYWKSTG KDRKILAPRT KKLIGTKKTL  120
VFYSGRVSNG IRTNWVIHEY HLHSDPQFAQ LRPFVICLLK KKLDENDVLI CDEAEQNGLM  180
NLTFDNEVSV NQNKEIPGNG QSLFPPNLQV SGYDFSQLES LLFCDREPIS MDFQANNSYG  240
TPVDRPTDEE IDIEEIYLHE GTPNSSTSGF NWKELLEKVD LDQGGALKGD TGMYATLNLQ  300
GNSTSHSMFD EHSSRVPTQT TPIIKESRRS PLTSKIFKYG GEEDLSSVRP RGDELQTNGI  360
SYLSDDSDRE TITLRFQSQP RSDKVVNHAK DSQNVQWKRK TQLQVVSSPD KAKAVSKWKK  420
VDGAAATSNK DIVVDRETEV KSRVAHQSNS TGRGSVESRG KRCSSILTTK CIHHRSSSAS  480
AYVARVCIGL ILFFVVARDM LLDGNW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35580.1	4e-51	NAC family protein