PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022974056.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 357aa MW: 40955.7 Da PI: 7.8294

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022974056.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	172.5	1.2e-53	13	142	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPtdeel+++yLkkkv+ +k+++ evi+e+d++k+ePwdL++k++ ++ewyfFs++d+ky+tg+r+nrat++g+Wkatg+dk + XP_022974056.1 13 VPPGFRFHPTDEELLHYYLKKKVSFQKFDM-EVIREIDLNKIEPWDLQEKCRIgstPQNEWYFFSHKDRKYPTGSRTNRATNAGFWKATGRDKCI 106 69**************************.99**********964433122456********************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129 + + +++g++ktLvfy+grap+g+ktdW+mheyrle XP_022974056.1 107 RN-SYKKIGMRKTLVFYRGRAPHGQKTDWIMHEYRLE 142 9.8999***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MGSSGGGGGG GGVPPGFRFH PTDEELLHYY LKKKVSFQKF DMEVIREIDL NKIEPWDLQE 60 KCRIGSTPQN EWYFFSHKDR KYPTGSRTNR ATNAGFWKAT GRDKCIRNSY KKIGMRKTLV 120 FYRGRAPHGQ KTDWIMHEYR LEDTDDLHFN NSEDGWVVCR VFKKKNLFKV TNEDEGGGSS 180 ANSDPHLNNT QSSASITTPR TFMHRESQYQ LRQPHQNYAS LPTFELNKSD LALHYMPSTA 240 PPSHFPHHLF HPNISTMNNN HKSLRDASEA YDYPTLSSLP PDTPLMVKQL MSNPETSQPA 300 DGMTEPWAML DRLVTSHLGN EDSSKDVRFE DEHGLSSVSQ INQLSMRGEM DFWRYAK

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MGSSGGGGGG GGVPPGFRFH PTDEELLHYY LKKKVSFQKF DMEVIREIDL NKIEPWDLQE  60
KCRIGSTPQN EWYFFSHKDR KYPTGSRTNR ATNAGFWKAT GRDKCIRNSY KKIGMRKTLV  120
FYRGRAPHGQ KTDWIMHEYR LEDTDDLHFN NSEDGWVVCR VFKKKNLFKV TNEDEGGGSS  180
ANSDPHLNNT QSSASITTPR TFMHRESQYQ LRQPHQNYAS LPTFELNKSD LALHYMPSTA  240
PPSHFPHHLF HPNISTMNNN HKSLRDASEA YDYPTLSSLP PDTPLMVKQL MSNPETSQPA  300
DGMTEPWAML DRLVTSHLGN EDSSKDVRFE DEHGLSSVSQ INQLSMRGEM DFWRYAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G10350.1	1e-142	NAC family protein