PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022974010.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C3H
Protein Properties Length: 343aa    MW: 37563.1 Da    PI: 9.4625
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022974010.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH30.65.6e-10193219127
                     --S---SGGGGTS--TTTTT-SS-SSS CS
         zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHgp 27 
                     y+t +Cr +  +G C++G +C+FaHg+
  XP_022974010.1 193 YRTDICRSWEDSGSCRFGHKCQFAHGK 219
                     89***********************96 PP

Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    
MEDRQGKRSS KPSIIKGLNP TVRPIKIQMD NHLVIGGTGH YHQETNSKIP TILDRYAEKH  60
DRSTPIVSYF RSRSPVVGKL PSAGDTCSTP VADVINASYR SSIINHFASS TSGSSSFGSR  120
RGGSSLSPLS ALENLETTPV RSPQIYGTPL KVHEEVIVMD EILISSVHGG AKTLKSALDS  180
GSGGGSSLSK NQYRTDICRS WEDSGSCRFG HKCQFAHGKE ELRPVHLPVK TKPKFGEPYL  240
THGLKSRNNH SLTGIAATTQ SNSLYATFKT ELNRRGHSIN SIHNLNTDWS PDDDGIEVVV  300
PETKSTRGDV DQHILEVLYG STTERAKKRL PVFVQLCSSR LEE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66810.11e-08C3H family protein