PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022974000.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C3H
Protein Properties Length: 235aa    MW: 25516.7 Da    PI: 10.029
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022974000.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH31.33.4e-10193219127
                     --S---SGGGGTS--TTTTT-SS-SSS CS
         zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHgp 27 
                     y+t +Cr +  +G C++G +C+FaHg+
  XP_022974000.1 193 YRTDICRSWEDSGSCRFGHKCQFAHGK 219
                     89***********************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MEDRQGKRSS KASIIKGLNP TVRPIKIQMD NHLVIGGTGH YHQETNSKIP TILDRYAEKH  60
DRSTPIVSYF RSRSPVVGKL PSAGDTFSTP VADVINASYR SSIINHFASS TSGSSSFGSR  120
RGGSSLSPLS ALENLETTPV RSPQIYGTPL KVHEEVIVMD EILISSVHGG AKTLKSALDS  180
GSGGGSSLSK NQYRTDICRS WEDSGSCRFG HKCQFAHGKE ELRPVHLPVK TKPKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66810.15e-09C3H family protein