PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022973905.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

AP2

Protein Properties

Length: 629aa MW: 68523.2 Da PI: 6.8622

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022973905.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	46.8	7.4e-15	263	322	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_022973905.1 263 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqtRKgRQVYLGGYDKEEKAARAYDLAALKYWG 322 57*****************666664478446***********************98 PP
2	AP2	46.9	7e-15	365	416	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_022973905.1 365 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 416 57**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 629 aa Download sequence
MGSINWLGFS LSPQQHQHQL PHHPSDLPHG VSAAAFTTDQ ISASDVPAVC FDNLPSSYGV 60 YDSQDWNSVK GLGQTQSSEF SGLIETHHQP KLENFLGHHS FTDQDHAAAV YTNASANYIF 120 QNCSLELPSE SNGGSGDGGG RPNASNGNYT SSIGLSMIKT WLRNQPAPLQ AVAKSGGDHD 180 GAVGKPNFTN PHTLSLSMNT GPPPPPSQSS DSEALPLLVT NGGKSSSSDK KQPKSSATKV 240 DTENSAIEAV PRKSMDTFGQ RTSIYRGVTR HRWTGRYEAH LWDNSCRREG QTRKGRQVYL 300 GGYDKEEKAA RAYDLAALKY WGTTTTTNFP ISDYEKELEE MKHMTRQEFV ASLRRKSSGF 360 SRGASIYRGV TRHHQHGRWQ ARIGRVAGNK DLYLGTFSTQ EEAAEAYDIA AIKFRGLNAV 420 TNFDMTRYDV KAILESNTLP IGGAAKRLKD IDHSDIPLHP QSTDENISSH LSDGMITTGG 480 GGWPTVAFHH HHPYASHYPY GALQQRLWCK QENDVTAGNF LDSVDQSSGS SSVVYSRDGY 540 GGNFVIPMGP EGGGLGDIGE VNMFGGGCNV DDPFHATRTS NLYNYNNSSH QLQQPPPELQ 600 GSSGNNWHPP ARSVCHGGTP PPFTIWNDT

Sequence ? help Back to Top

Protein Sequence Length: 629 aa Download sequence

MGSINWLGFS LSPQQHQHQL PHHPSDLPHG VSAAAFTTDQ ISASDVPAVC FDNLPSSYGV  60
YDSQDWNSVK GLGQTQSSEF SGLIETHHQP KLENFLGHHS FTDQDHAAAV YTNASANYIF  120
QNCSLELPSE SNGGSGDGGG RPNASNGNYT SSIGLSMIKT WLRNQPAPLQ AVAKSGGDHD  180
GAVGKPNFTN PHTLSLSMNT GPPPPPSQSS DSEALPLLVT NGGKSSSSDK KQPKSSATKV  240
DTENSAIEAV PRKSMDTFGQ RTSIYRGVTR HRWTGRYEAH LWDNSCRREG QTRKGRQVYL  300
GGYDKEEKAA RAYDLAALKY WGTTTTTNFP ISDYEKELEE MKHMTRQEFV ASLRRKSSGF  360
SRGASIYRGV TRHHQHGRWQ ARIGRVAGNK DLYLGTFSTQ EEAAEAYDIA AIKFRGLNAV  420
TNFDMTRYDV KAILESNTLP IGGAAKRLKD IDHSDIPLHP QSTDENISSH LSDGMITTGG  480
GGWPTVAFHH HHPYASHYPY GALQQRLWCK QENDVTAGNF LDSVDQSSGS SSVVYSRDGY  540
GGNFVIPMGP EGGGLGDIGE VNMFGGGCNV DDPFHATRTS NLYNYNNSSH QLQQPPPELQ  600
GSSGNNWHPP ARSVCHGGTP PPFTIWNDT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17430.1	1e-128	AP2 family protein