PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022973845.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 336aa MW: 39029.4 Da PI: 7.2601 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 56.7 | 3.1e-18 | 11 | 51 | 3 | 43 |
--SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TT CS SRF-TF 3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsst 43 i n+ r++tf kR++ +l KA+ELS+LCd++v+v++ +++ XP_022973845.1 11 IGNEKSRKTTFLKRKKSLLRKAYELSTLCDVRVCVLVHGPN 51 78999*********************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 336 aa Download sequence |
MGRGKLSMQL IGNEKSRKTT FLKRKKSLLR KAYELSTLCD VRVCVLVHGP NHNDQSPFEL 60 NTWPPCREEV NNMIASYKAN CLHKRARKAF DLLDFFSERK KKLENDMSKL RKDVLEARFP 120 KWDERLDHLT EDQLQILMVK LDSKLDTMKR RIEIVTKNHE EGTSGENNQT LIANMKPEQV 180 MSYGEQSYEM FGNPSMETQP MMPFHHQYHQ QLQTMAQNRQ MDHELENLSQ ILFGSNGSSA 240 QIQSNYGNNC FQNPNFYTDP TNGMVMDNTQ SYSMCHYGVP RATQSVLPVS YMPLIDDQMM 300 MACALNTQMG LANTSAQVND QFDCFNYEYF MKPNNF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G55690.1 | 1e-21 | M-type_MADS family protein |