PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022973611.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 280aa    MW: 31512 Da    PI: 6.8634
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022973611.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.91.5e-153481148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT +Ed llv+ +  +G g+W++ a + g++Rt+k+c++rw++yl
   XP_022973611.1 34 RGPWTVDEDSLLVHSISVHGEGRWNLLAIRSGLRRTGKSCRLRWLNYL 81
                     89********************************************97 PP
2Myb_DNA-binding51.32.6e-1687130146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+ +++E++l++d++ ++G++ W++Ia++++ gRt++++k++w++
   XP_022973611.1  87 RGNLSPQEQLLILDLHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 130
                      7899******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MRGCSLMASP CKTQSQSSSY SSSVVEDNQN GLRRGPWTVD EDSLLVHSIS VHGEGRWNLL  60
AIRSGLRRTG KSCRLRWLNY LKPDVKRGNL SPQEQLLILD LHSRWGNRWS KIAQHLPGRT  120
DNEIKNYWRT RVQKQAKLLN IDTNSSEFKE IINCFWIPRL VHQINESSNS PSSSFSSPPP  180
PNMPPARLAS QLSDTDTLPA ADGKGRHFDT EQNSTSSESV DISQVSDPFS DVPSWNHCSE  240
MTAAGFEYPI GNSRSPLTGW VDDDDTFGGC LWNFDGLWQF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25340.15e-72MYB family protein