PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022973417.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 348aa MW: 39602.1 Da PI: 8.1504

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022973417.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	172	1.9e-53	9	138	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPtdeel+++yLkkkv+ +k+++ +v++evd++k+ePwdL++k++ ++ewyfFs++d+ky+tg+r+nrat++g+Wkatg+dk + XP_022973417.1 9 VPPGFRFHPTDEELLHYYLKKKVSFQKFDM-DVVREVDLNKIEPWDLQEKCRIgstPQNEWYFFSHKDRKYPTGSRTNRATNAGFWKATGRDKCI 102 69**************************.99**********964433122456********************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129 + + +++g++ktLvfy+grap+g+ktdW+mheyrle XP_022973417.1 103 RN-SYKKIGMRKTLVFYRGRAPHGQKTDWIMHEYRLE 138 9.8999***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence
MASTGGTGVP PGFRFHPTDE ELLHYYLKKK VSFQKFDMDV VREVDLNKIE PWDLQEKCRI 60 GSTPQNEWYF FSHKDRKYPT GSRTNRATNA GFWKATGRDK CIRNSYKKIG MRKTLVFYRG 120 RAPHGQKTDW IMHEYRLEDA DDPHSNNNSE DGWVVCRVFK KKNLFKVTRE GEGGSSANSA 180 DHHLNNAHSS ASIATSRTFM HNQLRQPQQN YATHPTFELN KSDLALHYMP TTAPSSHFSH 240 PLFHPNISTL NHKPLGSTAA AYDYPSLSSL PPDTPLMVKQ LMSNPETDQP GDGMTEPWAM 300 LDRLVTSHLG NEDSSKDVRF EDENGSSSVS QINQLSLRGE MDFWGYAK

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence

MASTGGTGVP PGFRFHPTDE ELLHYYLKKK VSFQKFDMDV VREVDLNKIE PWDLQEKCRI  60
GSTPQNEWYF FSHKDRKYPT GSRTNRATNA GFWKATGRDK CIRNSYKKIG MRKTLVFYRG  120
RAPHGQKTDW IMHEYRLEDA DDPHSNNNSE DGWVVCRVFK KKNLFKVTRE GEGGSSANSA  180
DHHLNNAHSS ASIATSRTFM HNQLRQPQQN YATHPTFELN KSDLALHYMP TTAPSSHFSH  240
PLFHPNISTL NHKPLGSTAA AYDYPSLSSL PPDTPLMVKQ LMSNPETDQP GDGMTEPWAM  300
LDRLVTSHLG NEDSSKDVRF EDENGSSSVS QINQLSLRGE MDFWGYAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G10350.1	1e-146	NAC family protein