PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022973333.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

AP2

Protein Properties

Length: 427aa MW: 46848.6 Da PI: 8.4304

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022973333.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	54.1	4e-17	73	132	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n+ k+ k+++lg ++ +e Aa+a++ a++k++g XP_022973333.1 73 SIYRGVTRHRWTGRYEAHLWDkSTWNQnqnKKgKQVYLGAYDEEEAAARAYDLAALKYWG 132 57*****************766644468557***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 427 aa Download sequence
MASSSSDPAF KHEPGASCAA AAGGGTPESS EVVLANDQLL LYRGLKKPKK ERGCTAKERI 60 SKMPPCAAGK RSSIYRGVTR HRWTGRYEAH LWDKSTWNQN QNKKGKQVYL GAYDEEEAAA 120 RAYDLAALKY WGPGTLINFP LTDYTRDLEE MQTVSREEYL ASLRRKSSGF ARGISKYRGL 180 SSLFGRMSGP DCVNSIIYGA GDDQATVSEF IHNFCIERKI DLTSYIKWWG PNKNRTSSVG 240 SKLSEEDKHS SVGEVDSELK ALGQTTCPTE PYEMPCLGTL HGVKKVASKV SALSILSRSA 300 AYKSLQQKAL KLEEINNEND ENENKNTVSK IDHGKAVETH ASHGGDPNEK YGVAFGASGG 360 SPLQRNMFPL TPFLTAPLLS SYNTVDPLGD PIHWTSLVSV LPTGLSRTAE VTKTEISSTY 420 TLFRPEE

Sequence ? help Back to Top

Protein Sequence Length: 427 aa Download sequence

MASSSSDPAF KHEPGASCAA AAGGGTPESS EVVLANDQLL LYRGLKKPKK ERGCTAKERI  60
SKMPPCAAGK RSSIYRGVTR HRWTGRYEAH LWDKSTWNQN QNKKGKQVYL GAYDEEEAAA  120
RAYDLAALKY WGPGTLINFP LTDYTRDLEE MQTVSREEYL ASLRRKSSGF ARGISKYRGL  180
SSLFGRMSGP DCVNSIIYGA GDDQATVSEF IHNFCIERKI DLTSYIKWWG PNKNRTSSVG  240
SKLSEEDKHS SVGEVDSELK ALGQTTCPTE PYEMPCLGTL HGVKKVASKV SALSILSRSA  300
AYKSLQQKAL KLEEINNEND ENENKNTVSK IDHGKAVETH ASHGGDPNEK YGVAFGASGG  360
SPLQRNMFPL TPFLTAPLLS SYNTVDPLGD PIHWTSLVSV LPTGLSRTAE VTKTEISSTY  420
TLFRPEE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41710.1	1e-141	AP2 family protein