PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022972938.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 359aa MW: 40671.5 Da PI: 4.6466

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022972938.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	123.6	1.7e-38	16	142	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 ppG+rFhPtdee+v+++Lk+k+ + k++ + ++++d yk+eP++Lp +k+k++++ wyfFs+ k + ++ r+t +g+Wkatgk+ v+s XP_022972938.1 16 PPGVRFHPTDEEIVMRFLKPKICDPKTQS-DYVTDIDFYKSEPKELPglSKLKTGDRLWYFFSPIVLKFGNRAKSVRTTGHGFWKATGKKVFVKS 109 8***********************998.89***********6559999*******************************999988 PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128 +g++vgl++t+vfyk +a+ e+tdWvmhey+l XP_022972938.1 110 -NGRTVGLRRTFVFYKRHASIRERTDWVMHEYTL 142 .999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MQVFRQTSAH DVNPWPPGVR FHPTDEEIVM RFLKPKICDP KTQSDYVTDI DFYKSEPKEL 60 PGLSKLKTGD RLWYFFSPIV LKFGNRAKSV RTTGHGFWKA TGKKVFVKSN GRTVGLRRTF 120 VFYKRHASIR ERTDWVMHEY TLEEEELKRC PNVQVCYAVC KVREKSGPGP KNGEQYGAPV 180 NDDSVDQEVL VEEPEMDNVV PGSQCHSLPR SIETFDSEQQ PSKAPESLNL TESDMSQLPP 240 SQTPNAEFAF NFSELDSSSW DGDFMEIADM LPEACLNTEN PSGSGNLWNE ALNNLMDELD 300 RRHDVEMVYK ELGMFLDDLG PSEDDGTVPM AEQNENVNHA ANTMDVPLQS IMKSSSQGK

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MQVFRQTSAH DVNPWPPGVR FHPTDEEIVM RFLKPKICDP KTQSDYVTDI DFYKSEPKEL  60
PGLSKLKTGD RLWYFFSPIV LKFGNRAKSV RTTGHGFWKA TGKKVFVKSN GRTVGLRRTF  120
VFYKRHASIR ERTDWVMHEY TLEEEELKRC PNVQVCYAVC KVREKSGPGP KNGEQYGAPV  180
NDDSVDQEVL VEEPEMDNVV PGSQCHSLPR SIETFDSEQQ PSKAPESLNL TESDMSQLPP  240
SQTPNAEFAF NFSELDSSSW DGDFMEIADM LPEACLNTEN PSGSGNLWNE ALNNLMDELD  300
RRHDVEMVYK ELGMFLDDLG PSEDDGTVPM AEQNENVNHA ANTMDVPLQS IMKSSSQGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34180.1	4e-63	NAC family protein