PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022972888.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | ERF | ||||||||
Protein Properties | Length: 307aa MW: 32244.7 Da PI: 8.2863 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.4 | 2e-19 | 148 | 197 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp + +r++lg+f+tae Aa+a++ a+++++g XP_022972888.1 148 RYRGVRQRP-WGKWAAEIRDPQ----KaTRVWLGTFDTAEAAAQAYDGAALRFRG 197 7********.**********93....36************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 307 aa Download sequence |
MCYFKVAKQG GGGDMPEAIF SSAGEIITMV SALTHVISSG APPGYGGAGD LSGVGYSSGF 60 APPATTVAAG GGCRKREREE DGESGIMWGS GIGNGYSGGR IVDFGAVQSY WEPSVSICGG 120 SNSSNAISAA TETRTPAAIS GEENPRRRYR GVRQRPWGKW AAEIRDPQKA TRVWLGTFDT 180 AEAAAQAYDG AALRFRGSKA KLNFPEFVTV LPPSAQPNAH WAPSPVGAPP LQPPGSGNYL 240 QYSYFPQNSG EFPERVLCNS RFVNPSSSGA SNFAFPFSEQ QQRLFRPPEN ETNGGGSSIG 300 YRPPAAG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G43160.1 | 1e-19 | ERF family protein |