PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022972608.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HD-ZIP

Protein Properties

Length: 169aa MW: 19477.8 Da PI: 6.6876

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022972608.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.9	2e-19	14	67	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+ +f+++qle Le+ F+++ ++ +++ +L+k++gL+ rq+ vWFqNrRa+ k XP_022972608.1 14 KKKRFSQDQLESLERSFQEEVKLEPDRKMKLSKEIGLQPRQIAVWFQNRRARSK 67 5678************************************************98 PP
2	HD-ZIP_I/II	110.1	1.5e-35	13	105	1	93
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekk+r+s++q+++LE+sF+ee kLep+rK++l++e+glqprq+avWFqnrRAR k kql + y++Lk+++da++ e+ L+++v+eLr+ l+e XP_022972608.1 13 EKKKRFSQDQLESLERSFQEEVKLEPDRKMKLSKEIGLQPRQIAVWFQNRRARSKVKQLQHLYDTLKQEFDAISMEKIDLQQQVRELRSMLRE 105 69**************************************************************************************98875 PP

Sequence ? help Back to Top
Protein Sequence Length: 169 aa Download sequence
MEAHESRGGG VDEKKKRFSQ DQLESLERSF QEEVKLEPDR KMKLSKEIGL QPRQIAVWFQ 60 NRRARSKVKQ LQHLYDTLKQ EFDAISMEKI DLQQQVRELR SMLREQAVRN HGSMAYMTVS 120 EEEAAESTAE GVRSCNNHIF NVENVDQISA SSIPSLWSSS QAAHLPSYP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	14	43	KKKRFSQDQLESLERSFQEEVKLEPDRKMK
2	62	70	RRARSKVKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03790.1	7e-40	HD-ZIP family protein