PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022972578.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 383aa MW: 41668.1 Da PI: 10.1786

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022972578.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.6	2.2e-05	49	71	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++C+k F r nL+ H r H XP_022972578.1 49 FICEICNKGFQRDQNLQLHRRGH 71 89*******************88 PP
2	zf-C2H2	13.2	0.00027	125	147	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H +t+ XP_022972578.1 125 WKCEKCSKKYAVQSDWKAHSKTC 147 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence
MSEQSSQLYH LPHNPNPNPK KKRNLPGKPD PDAEVISLSP NALMATNRFI CEICNKGFQR 60 DQNLQLHRRG HNLPWKLRQR SNKEVKKKVY ICPEKSCVHH DPARALGDLT GIKKHFSRKH 120 GEKKWKCEKC SKKYAVQSDW KAHSKTCGTR EYKCDCGTLF SRKDSFITHR AFCDALADES 180 GRLISSVAAA AAAAAANSTP NFIANSLNES LFNSQGGIFV QSDHNNFPIN TTFPFPQIPP 240 SNLFQISNRI LGLNKNSSKT AVNLSSFCSG GSGGGGKSII PMSATALLLK AAHFGSMKSI 300 PSFSGNSVGV MSSSSSSFDQ SKGELQRMGS NGGNGNGLRD FLGTREREGN GNVELVSLME 360 MSKFGSSMSS EMGLSEFIGN ARG

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence

MSEQSSQLYH LPHNPNPNPK KKRNLPGKPD PDAEVISLSP NALMATNRFI CEICNKGFQR  60
DQNLQLHRRG HNLPWKLRQR SNKEVKKKVY ICPEKSCVHH DPARALGDLT GIKKHFSRKH  120
GEKKWKCEKC SKKYAVQSDW KAHSKTCGTR EYKCDCGTLF SRKDSFITHR AFCDALADES  180
GRLISSVAAA AAAAAANSTP NFIANSLNES LFNSQGGIFV QSDHNNFPIN TTFPFPQIPP  240
SNLFQISNRI LGLNKNSSKT AVNLSSFCSG GSGGGGKSII PMSATALLLK AAHFGSMKSI  300
PSFSGNSVGV MSSSSSSFDQ SKGELQRMGS NGGNGNGLRD FLGTREREGN GNVELVSLME  360
MSKFGSSMSS EMGLSEFIGN ARG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G45260.1	1e-93	C2H2 family protein