PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022972309.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Nin-like

Protein Properties

Length: 973aa MW: 107425 Da PI: 5.3583

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022972309.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92.3	3.7e-29	585	635	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek++sl++l++yFs+++kdAAk++gvc+T+LKriCRq+GI RWP+Rki+++ XP_022972309.1 585 EKNVSLSVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGILRWPSRKINKV 635 89***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 973 aa Download sequence
MEKPFSSKEE GMMGYWGPSR THAETMNSTD AGMRILSPED VLPSFSDMMN FDSYAAIDQI 60 FTSCGFSSIP QMSTCGSIEG LSFVEGGCHE GFPLNEHGGS SISMANSFTC GDKVMFHLPD 120 TEFGVSNVSD NANKVDSKSN DVPVDMDSCL ISRPFGWSLD EKMLRVLSMF KESSPGGILA 180 QVWVPVKRRD QFFLSTSEQP YLLDQMLTGY REVSRSFTFS AEGKLGSLLG LPGRVFTSKL 240 PEWTSNVRYY SDHEYLRMQH AIGHDVYGSI ALPVFNNEVE KSCCAVLEVV TTKEKPNFDA 300 EIDIVSQALE TVSLSTVPPP RLYSQCLKKN QRAALAEIVD VLRAVCHAHR LPLALTWIPC 360 CYSLDAVDEV ARVRVKENNI NPEEKFVLCI EETACYVNDK STQGFVHACL EHHLEEGQGI 420 AGKALQSNHP FFYPDVKAYD INKYPLVHHA RKFGLNAAVA IRLRSMYTGN DDYILEFFLP 480 VNMKGAAEQQ LLLNNLSVTM QRMCRSLRTV SKEELIGAED SVVDFQSGLI GKSTTTSMRN 540 SQSTVTDRET RVSNSINNGA EAECPEKQMT DGSRKQGEKK RSTSEKNVSL SVLQQYFSGS 600 LKDAAKSIGV CPTTLKRICR QHGILRWPSR KINKVNRSLR KIQTVLDSVK GVEGGLKFDP 660 TTGCLMAGSL IPEFNAQNSL LFSDNNPAIP NLDPFLHDVN SVPSAPFNTQ NSAIKLEMDE 720 SSVSISQRTS SRSVLIPEKE PNVRQRDCSE GLESAGVDAA SCQLADLDMM SWDVQGNASV 780 SIAAKKSDRL DFVKNDLRSG DADCQFMAKS LISFAAADEV GTVLNEHYQP TTSSMTDSSN 840 GSGLMIHGSS SSSQSVERKH LPEKVGSVDS ESKIIVKASY KDDTVRFKFD PCLGYLQLYE 900 EVGMRFKLNQ GTFQLKYLDD EKEWVMLVSN SDLQECLEVM DEIGTRNVKF LVREIACAVG 960 SSGSSSCFLS GCS

Sequence ? help Back to Top

Protein Sequence Length: 973 aa Download sequence

MEKPFSSKEE GMMGYWGPSR THAETMNSTD AGMRILSPED VLPSFSDMMN FDSYAAIDQI  60
FTSCGFSSIP QMSTCGSIEG LSFVEGGCHE GFPLNEHGGS SISMANSFTC GDKVMFHLPD  120
TEFGVSNVSD NANKVDSKSN DVPVDMDSCL ISRPFGWSLD EKMLRVLSMF KESSPGGILA  180
QVWVPVKRRD QFFLSTSEQP YLLDQMLTGY REVSRSFTFS AEGKLGSLLG LPGRVFTSKL  240
PEWTSNVRYY SDHEYLRMQH AIGHDVYGSI ALPVFNNEVE KSCCAVLEVV TTKEKPNFDA  300
EIDIVSQALE TVSLSTVPPP RLYSQCLKKN QRAALAEIVD VLRAVCHAHR LPLALTWIPC  360
CYSLDAVDEV ARVRVKENNI NPEEKFVLCI EETACYVNDK STQGFVHACL EHHLEEGQGI  420
AGKALQSNHP FFYPDVKAYD INKYPLVHHA RKFGLNAAVA IRLRSMYTGN DDYILEFFLP  480
VNMKGAAEQQ LLLNNLSVTM QRMCRSLRTV SKEELIGAED SVVDFQSGLI GKSTTTSMRN  540
SQSTVTDRET RVSNSINNGA EAECPEKQMT DGSRKQGEKK RSTSEKNVSL SVLQQYFSGS  600
LKDAAKSIGV CPTTLKRICR QHGILRWPSR KINKVNRSLR KIQTVLDSVK GVEGGLKFDP  660
TTGCLMAGSL IPEFNAQNSL LFSDNNPAIP NLDPFLHDVN SVPSAPFNTQ NSAIKLEMDE  720
SSVSISQRTS SRSVLIPEKE PNVRQRDCSE GLESAGVDAA SCQLADLDMM SWDVQGNASV  780
SIAAKKSDRL DFVKNDLRSG DADCQFMAKS LISFAAADEV GTVLNEHYQP TTSSMTDSSN  840
GSGLMIHGSS SSSQSVERKH LPEKVGSVDS ESKIIVKASY KDDTVRFKFD PCLGYLQLYE  900
EVGMRFKLNQ GTFQLKYLDD EKEWVMLVSN SDLQECLEVM DEIGTRNVKF LVREIACAVG  960
SSGSSSCFLS GCS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59580.1	0.0	Nin-like family protein