PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022972195.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB | ||||||||
Protein Properties | Length: 303aa MW: 33611 Da PI: 5.0197 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57.6 | 2.9e-18 | 25 | 72 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd l+++++ +G g+W++ ar+ g++Rt+k+c++rw++yl XP_022972195.1 25 RGPWTVEEDIALINYIANHGDGRWNLLARCAGLKRTGKSCRLRWLNYL 72 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 52.2 | 1.4e-16 | 78 | 121 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T eE++l++d++ ++G++ W++Ia++++ gRt++++k++w++ XP_022972195.1 78 RGNITLEEQLLILDLHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 121 7999******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 303 aa Download sequence |
MDGNKDRQID SGNFQGGDDD GDLRRGPWTV EEDIALINYI ANHGDGRWNL LARCAGLKRT 60 GKSCRLRWLN YLRPDVRRGN ITLEEQLLIL DLHSRWGNRW SKIAQHLPGR TDNEIKNYWR 120 TRVQKHAKQL KCDVNSKQFK DTMRYLWIPR LVERIQASAA ATTAVDGNGS YGSVAPPLMN 180 NGSDFVSTSQ VTPSYASENS SSGGGSSDGT QGSSVSELTD CYNNFGCFSV GYGQDTAPPP 240 PPPPPMQSSA VGFFNEGELD FQAMEQSSCE WLAEDGGVDT SENFWSTAGP GTDYFWLLQQ 300 HLN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G49620.1 | 4e-84 | MYB family protein |