PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022972130.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | GATA | ||||||||
Protein Properties | Length: 150aa MW: 16500.8 Da PI: 10.3235 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 58.7 | 7.9e-19 | 38 | 72 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C+ Cgt+kTplWR gp g+k+LCnaCG++ rkk++ XP_022972130.1 38 CADCGTSKTPLWRGGPAGPKSLCNACGIRSRKKRR 72 ********************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 150 aa Download sequence |
MMMDPSDRVS ESEDISSKNS GGVSSEESQV NEQNKKTCAD CGTSKTPLWR GGPAGPKSLC 60 NACGIRSRKK RRAILGLSKG VVEDKKNKRS NSCNNISNSK LRDSLKQRLM ALGREVLMQR 120 YSVERQRKKL GEEEQAAVLL MALSYGSVFA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G06740.1 | 1e-53 | GATA family protein |