PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022971968.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

ARR-B

Protein Properties

Length: 518aa MW: 58218.1 Da PI: 6.6056

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022971968.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	88.9	4.8e-28	277	330	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k +++WtpeLH++Fv+aveqL G+++A+P++ilelmkv+gLt+++v+SHLQkYR+ XP_022971968.1 277 KSKVDWTPELHKKFVQAVEQL-GIDHAIPSKILELMKVEGLTRHNVASHLQKYRM 330 6799***************.******************************8 PP
2	Myb_DNA-binding	45.6	1.6e-14	280	329	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e+++++v+av+qlG + +++I + m +g+t+ ++ s++qky+ XP_022971968.1 280 VDWTPELHKKFVQAVEQLGIDhaIPSKILELMKvEGLTRHNVASHLQKYR 329 57***********************************************7 PP
3	Response_reg	24.7	1.2e-09	20	126	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+ d + + ++ +r+ le+ +y +v +++d +ea + + +++ +l + + d e +k + ++ ++lpii+ ++ +++ +++ +G XP_022971968.1 20 VLLLDRDSSSASEIRSKLEEMEY-VVYSCTDEKEAFSAILNTPgnFHVAILEVCARNYD--ESFKLLGTS-MDLPIIMTSDVHCLSTMMKCIALG 110 7888999999999********.*9999999999777667****999976..677777554.48****************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a +fl Kp ++++l++ XP_022971968.1 111 AVEFLLKPLSEDKLRN 126 ***********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 518 aa Download sequence
MVCTIDDLQG WKDFPKGLRV LLLDRDSSSA SEIRSKLEEM EYVVYSCTDE KEAFSAILNT 60 PGNFHVAILE VCARNYDESF KLLGTSMDLP IIMTSDVHCL STMMKCIALG AVEFLLKPLS 120 EDKLRNIWQH VLHKAFSNTP KPDEHSVASL MQLQLENKDK NEAQEDMEML SWIQDVVWEP 180 PEGSEKSQLN LGESWQGSWE SEHQMNCSME TDSREKEVYP KFVKTATHDL VCEGPFQEGQ 240 PRLSGKNKSD VKSSASAAEH SNQGSDVNHS AGSKAKKSKV DWTPELHKKF VQAVEQLGID 300 HAIPSKILEL MKVEGLTRHN VASHLQKYRM QKKHIMHREE NPWWSHPRCT IQTNHLKPIM 360 AYPSYHPNCG ISPSAAFPTW RQTNGHPANA LVRGPPGFFH WPQPGIQPWN SYAAGVQADA 420 WGCPVTLPSH APYFAHPQHV LSASHNMHTV NKSYGMPQSS FDLQPDEEVV DKVVREAMRM 480 PCSPLPLGLK PATERVLTEL SMQGISIVPP QINGSRPP

Sequence ? help Back to Top

Protein Sequence Length: 518 aa Download sequence

MVCTIDDLQG WKDFPKGLRV LLLDRDSSSA SEIRSKLEEM EYVVYSCTDE KEAFSAILNT  60
PGNFHVAILE VCARNYDESF KLLGTSMDLP IIMTSDVHCL STMMKCIALG AVEFLLKPLS  120
EDKLRNIWQH VLHKAFSNTP KPDEHSVASL MQLQLENKDK NEAQEDMEML SWIQDVVWEP  180
PEGSEKSQLN LGESWQGSWE SEHQMNCSME TDSREKEVYP KFVKTATHDL VCEGPFQEGQ  240
PRLSGKNKSD VKSSASAAEH SNQGSDVNHS AGSKAKKSKV DWTPELHKKF VQAVEQLGID  300
HAIPSKILEL MKVEGLTRHN VASHLQKYRM QKKHIMHREE NPWWSHPRCT IQTNHLKPIM  360
AYPSYHPNCG ISPSAAFPTW RQTNGHPANA LVRGPPGFFH WPQPGIQPWN SYAAGVQADA  420
WGCPVTLPSH APYFAHPQHV LSASHNMHTV NKSYGMPQSS FDLQPDEEVV DKVVREAMRM  480
PCSPLPLGLK PATERVLTEL SMQGISIVPP QINGSRPP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18020.3	5e-94	ARR-B family protein