PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022971967.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | ARR-B | ||||||||
Protein Properties | Length: 518aa MW: 58218.1 Da PI: 6.6056 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 88.9 | 4.8e-28 | 277 | 330 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k +++WtpeLH++Fv+aveqL G+++A+P++ilelmkv+gLt+++v+SHLQkYR+ XP_022971967.1 277 KSKVDWTPELHKKFVQAVEQL-GIDHAIPSKILELMKVEGLTRHNVASHLQKYRM 330 6799*****************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 45.6 | 1.6e-14 | 280 | 329 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e+++++v+av+qlG + +++I + m +g+t+ ++ s++qky+ XP_022971967.1 280 VDWTPELHKKFVQAVEQLGIDhaIPSKILELMKvEGLTRHNVASHLQKYR 329 57***********************************************7 PP | |||||||
3 | Response_reg | 24.7 | 1.2e-09 | 20 | 126 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+ d + + ++ +r+ le+ +y +v +++d +ea + + +++ +l + + d e +k + ++ ++lpii+ ++ +++ +++ +G XP_022971967.1 20 VLLLDRDSSSASEIRSKLEEMEY-VVYSCTDEKEAFSAILNTPgnFHVAILEVCARNYD--ESFKLLGTS-MDLPIIMTSDVHCLSTMMKCIALG 110 7888999999999**********.*****9999999999777667********999976..677777554.48********************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a +fl Kp ++++l++ XP_022971967.1 111 AVEFLLKPLSEDKLRN 126 *************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 518 aa Download sequence |
MVCTIDDLQG WKDFPKGLRV LLLDRDSSSA SEIRSKLEEM EYVVYSCTDE KEAFSAILNT 60 PGNFHVAILE VCARNYDESF KLLGTSMDLP IIMTSDVHCL STMMKCIALG AVEFLLKPLS 120 EDKLRNIWQH VLHKAFSNTP KPDEHSVASL MQLQLENKDK NEAQEDMEML SWIQDVVWEP 180 PEGSEKSQLN LGESWQGSWE SEHQMNCSME TDSREKEVYP KFVKTATHDL VCEGPFQEGQ 240 PRLSGKNKSD VKSSASAAEH SNQGSDVNHS AGSKAKKSKV DWTPELHKKF VQAVEQLGID 300 HAIPSKILEL MKVEGLTRHN VASHLQKYRM QKKHIMHREE NPWWSHPRCT IQTNHLKPIM 360 AYPSYHPNCG ISPSAAFPTW RQTNGHPANA LVRGPPGFFH WPQPGIQPWN SYAAGVQADA 420 WGCPVTLPSH APYFAHPQHV LSASHNMHTV NKSYGMPQSS FDLQPDEEVV DKVVREAMRM 480 PCSPLPLGLK PATERVLTEL SMQGISIVPP QINGSRPP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18020.3 | 5e-94 | ARR-B family protein |