PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022971584.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB | ||||||||
Protein Properties | Length: 297aa MW: 33048.9 Da PI: 9.5172 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.9 | 3.6e-16 | 70 | 115 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v+ +G+ +W++Ia+ + gR++k+c++rw++ XP_022971584.1 70 RGHWRPAEDAKLKELVAHYGPQNWNLIAENLR-GRSGKSCRLRWFNQ 115 899*****************************.***********996 PP | |||||||
2 | Myb_DNA-binding | 53.9 | 4.1e-17 | 122 | 165 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r+++ +eE+e+l+ a++++G++ W+ Iar ++ gRt++ +k++w+ XP_022971584.1 122 RKAFNEEEEERLLTAHRLYGNK-WAMIARLFP-GRTDNAVKNHWHV 165 7899******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 297 aa Download sequence |
MNLQCFNDAF QTHGVFQNVA FMPPPPPASL DLSPPSHGGH SGRSNCEDRE KQEEDGKTNG 60 ARRRTKLCAR GHWRPAEDAK LKELVAHYGP QNWNLIAENL RGRSGKSCRL RWFNQLDPRI 120 NRKAFNEEEE ERLLTAHRLY GNKWAMIARL FPGRTDNAVK NHWHVIMARK HRQYSNLYRR 180 SSRKAFHKHN VSSESTISST VDESPASASA SAPAPAPAPR WCSRKGVAAG VGKIGCWEKT 240 EEVMAAEQSS GSNSEVSGAE SEISTNLSLA SGWESMNGND GHHMKMQFID FLGVGAS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69560.1 | 3e-69 | MYB family protein |