PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022971570.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB | ||||||||
Protein Properties | Length: 540aa MW: 59792.8 Da PI: 9.4864 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48.9 | 1.6e-15 | 59 | 105 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT++Ede l +av+ + g++Wk+Ia+++ R++ qc +rwqk+l XP_022971570.1 59 KGGWTPQEDETLRNAVAAFKGKHWKKIAEYFH-DRSEVQCLHRWQKVL 105 688*****************************.************986 PP | |||||||
2 | Myb_DNA-binding | 56.7 | 5.7e-18 | 111 | 157 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W +eEd++++++v ++G+ W++Ia+ ++ gR +kqc++rw+++l XP_022971570.1 111 KGPWAQEEDDKIIELVSKYGPTKWSLIAKSLP-GRIGKQCRERWHNHL 157 79******************************.*************97 PP | |||||||
3 | Myb_DNA-binding | 52.8 | 9.4e-17 | 163 | 206 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +++WT eE++ l +a++++G++ W+ Iar ++ gRt++ +k++w++ XP_022971570.1 163 KDAWTLEEELALMNAHRLHGNK-WAEIARVLP-GRTDNGIKNHWNS 206 679*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 540 aa Download sequence |
MEEVKQEECC LENKQSTAAS SSSVSEGSGS ATAKSPGMCS PASTSPARRR TSGPIRRAKG 60 GWTPQEDETL RNAVAAFKGK HWKKIAEYFH DRSEVQCLHR WQKVLNPDLV KGPWAQEEDD 120 KIIELVSKYG PTKWSLIAKS LPGRIGKQCR ERWHNHLNPD IKKDAWTLEE ELALMNAHRL 180 HGNKWAEIAR VLPGRTDNGI KNHWNSSLKK KLDFYLATGK LPPVSKNSSQ NGARDATRTP 240 PIKNFPPHSS RGSDSTAQTS SGNTDFYKLD GSSKDQIESS APPDEDVVAS TSGVLNESAD 300 SRHVKCWPGP SNITNLRVRK SGSARKNGTK TQGESDSEIS KLDEDKTTRT PLRFESPKYG 360 SLYYEPPKLE SRIPVDSELL SIYMHETNSS LITSPIGIFT PPCVKTRDLS IHSPESILRI 420 AARSFPSTPS ILRKRKTEAQ TCLPLKQAQD GETETVKDIS QESRLEETLN NSDSMLGSPN 480 GSLCDSPSID HSPSRSNSKA FNASPPYRLT SKRTAISKSV EKQLEFAFDK EKNNHTIKSA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G02320.2 | 1e-157 | MYB family protein |