PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022971554.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WOX

Protein Properties

Length: 272aa MW: 30923.5 Da PI: 6.5888

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022971554.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	64.6	1.4e-20	94	154	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+ + ql++Le+ Fe+ n +ps+++++e++++l +++e++V++WFqNrRa+ k+ XP_022971554.1 94 RQRWTPLPVQLQILERIFEQgNGTPSKQKIKEITSELgqhgQISESNVYNWFQNRRARSKR 154 89***************99************************************97 PP
2	Wus_type_Homeobox	97.3	1.2e-31	93	156	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +r+RWtP p Q++iLe+++++G tP+k++i++it+eL ++G+i++ NV++WFQNr+aR+++kq XP_022971554.1 93 SRQRWTPLPVQLQILERIFEQGNGTPSKQKIKEITSELGQHGQISESNVYNWFQNRRARSKRKQ 156 789***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 272 aa Download sequence
MMDPYHHHHQ NPPLRDDHLR YLTGTTAGAL YVKVMTDEQL ETLRKQIAVY ATICEQLVEM 60 HKTLTAHQDL KGMRLGSVYY EPLMASSSHK ITSRQRWTPL PVQLQILERI FEQGNGTPSK 120 QKIKEITSEL GQHGQISESN VYNWFQNRRA RSKRKQQGTA PAYGESELET EVESPKDKKT 180 KPVDFQTPQT SAPLGEDVGF QSPEMHYELH FLDPNTNKAD TLFPSNGSSK TARSFSQMSS 240 YEAGNEQLTG KIETPENYSL YSQAEGCMTE QP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	148	156	RRARSKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35550.1	8e-80	WOX family protein