PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022971432.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GRAS
Protein Properties Length: 757aa    MW: 85716.1 Da    PI: 5.2755
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022971432.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS382.64.7e-1173827531374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL++cA+av+++d+++a++lL++++++asp gd +qRla++f+ +L+arla+++s++yk l  ++ts    +++l+a++l+  ++P+ k+s+
  XP_022971432.1 382 LRTLLISCAQAVAADDHRNASELLKQVRQHASPFGDGNQRLASCFADGLEARLAGTGSQIYKGLINKRTS---AADVLKAYHLYLAACPFRKISN 473
                     6789************************************************************888888...89******************** PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     +t N++ + a e+++++H+iDf+i +G+QWp+L+q L+ R++gpp+lRiTg++ p++g   +e++eetg+rL+ +Ae+++vpfe+n+ +ak++e+
  XP_022971432.1 474 FTSNRTTMIASENATKLHVIDFGILYGFQWPTLIQRLSWRKGGPPKLRITGIEFPQPGfrPAERVEETGRRLEAYAETFNVPFEYNA-IAKKWET 567
                     *********************************************************9*****************************.7****** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     +++e+L++++gE ++Vn+ ++ ++ll+esv++es+r++vL+l+ +++P++++    +  +n++ F++rf eal ++sa+fd+le+ +pre+ er+
  XP_022971432.1 568 ITVEDLNIDQGEFIVVNCLYRAKNLLEESVATESPRNTVLRLIHKINPNLFITGVVNGAYNAPFFVTRFREALFHFSAIFDTLETVVPREDWERM 662
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                      +Ere++gre+ nv+aceg er+er et+++W+ r+++aGF+++p+  ++ + a   +r  + + + ++e+s+++++gWk+r ++++SaW+
  XP_022971432.1 663 LLEREIFGREALNVIACEGWERVERPETYKQWQFRIMRAGFEQLPFHPEIFERAVEKVRSSYHRDFLIDEDSKWILQGWKGRIIYAISAWK 753
                     **************************************************************999*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 757 aa     Download sequence    
MDPRLRRHGG SMNGILLDNG SFLVQSQEDG IGSIFQNTIM SHSFQEFDCL PPDPSPSTIA  60
SSSSVITSSS NDASHEEDYL EDCDFSDAVL RFINQILMEE DMEDKTCMLQ DSLDLQAAEK  120
PFYEVLGKKY PPSPEPNRSL GNQYSDSFNE ELCGDSSNYL IGYNNTSYYG DDNAFETQSG  180
DVFRIRSTLG DTISPSSNSS SNRIVNGADG WVDFSNNAIR IPEPNNRSQS IWQFQKGLEE  240
ASKFLPGGNN LCLDFEGNES ATQGLDEGTC QMYVKAARND QRKTLSLESR IRKNLHDEDG  300
DLEEERSSKQ AAISTESTLR SKMFDIVLLC SAGEGHDRLV SFRQELRNAK IKSMLQTGQL  360
KESNGGRGRR KKQSGKKEVV DLRTLLISCA QAVAADDHRN ASELLKQVRQ HASPFGDGNQ  420
RLASCFADGL EARLAGTGSQ IYKGLINKRT SAADVLKAYH LYLAACPFRK ISNFTSNRTT  480
MIASENATKL HVIDFGILYG FQWPTLIQRL SWRKGGPPKL RITGIEFPQP GFRPAERVEE  540
TGRRLEAYAE TFNVPFEYNA IAKKWETITV EDLNIDQGEF IVVNCLYRAK NLLEESVATE  600
SPRNTVLRLI HKINPNLFIT GVVNGAYNAP FFVTRFREAL FHFSAIFDTL ETVVPREDWE  660
RMLLEREIFG REALNVIACE GWERVERPET YKQWQFRIMR AGFEQLPFHP EIFERAVEKV  720
RSSYHRDFLI DEDSKWILQG WKGRIIYAIS AWKPTQE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.10.0GRAS family protein