PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022971415.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 263aa    MW: 29189.8 Da    PI: 9.7809
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022971415.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.51.5e-082167347
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47
                     +WT eE +++ +a +++ ++   +W ++a++++ g+t  ++ + ++ +
   XP_022971415.1 21 NWTVEENKRFENALALFDSDssdRWLKVAAMIP-GKTVGDVMNQYREL 67
                     8********************************.*********99865 PP
2Myb_DNA-binding47.54e-15127171347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ +++ + k++G+g+W+ I+r + ++Rt+ q+ s+ qky
   XP_022971415.1 127 PWTEEEHRQFLMGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKY 171
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MKRGIGILSP ATDRRSSSCS NWTVEENKRF ENALALFDSD SSDRWLKVAA MIPGKTVGDV  60
MNQYRELVAD VSDIEAGLVP IPGYATGNSF VLEWSNDGCG FGSVYGGAGK RGVSGRPSDH  120
ERKKGVPWTE EEHRQFLMGL KKYGKGDWRN ISRNFVTTRT PTQVASHAQK YFIRQLTGGK  180
DRRRSSIHDI TIVNLPDNLT HPNTKSPYSP IPYNGVTPNC GISSLGPKLL QDRIFVGGNI  240
HGCQNIGPYS PNVFQVQREQ QYK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.11e-100MYB family protein