PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022971296.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 351aa MW: 40331.3 Da PI: 6.5663

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022971296.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.2	3.1e-05	174	193	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++Cp C k+F+r n++ H+ XP_022971296.1 174 FSCPVCFKTFNRYNNMQMHM 193 89*****************9 PP
2	zf-C2H2	14.5	0.0001	258	280	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk F + + ++H +++ XP_022971296.1 258 FMCRKCGKAFAVRGDWRTHEKNC 280 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
MDDPSTNFFT DLFKFNYPTN FHHHHHNPPS SNPPPNFFHA PPSSPPLRQA LPLLRLSPTR 60 SSQDHHLSFT SSSAMEIDNN NNNDNEDVSV TVALHIGLPS SNASEMATLL VSDNNNQNEE 120 EDQLEEELEE EEDEDEEQQQ AGITISGFSL SSRLNKGQYW IPTPSQILIG PTQFSCPVCF 180 KTFNRYNNMQ MHMWGHGSQY RRGPESLRGT QPTGMLRLPC YCCSPGCRNN IDHPRAKPLK 240 DFRTLQTHYK RKHGIKPFMC RKCGKAFAVR GDWRTHEKNC GKLWYCICGS DFKHKRSLKD 300 HIKAFGNGHG AYNSNINNND DHRQQQQHHH HHHAFDEEDE SAYSEVEEDH D

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

MDDPSTNFFT DLFKFNYPTN FHHHHHNPPS SNPPPNFFHA PPSSPPLRQA LPLLRLSPTR  60
SSQDHHLSFT SSSAMEIDNN NNNDNEDVSV TVALHIGLPS SNASEMATLL VSDNNNQNEE  120
EDQLEEELEE EEDEDEEQQQ AGITISGFSL SSRLNKGQYW IPTPSQILIG PTQFSCPVCF  180
KTFNRYNNMQ MHMWGHGSQY RRGPESLRGT QPTGMLRLPC YCCSPGCRNN IDHPRAKPLK  240
DFRTLQTHYK RKHGIKPFMC RKCGKAFAVR GDWRTHEKNC GKLWYCICGS DFKHKRSLKD  300
HIKAFGNGHG AYNSNINNND DHRQQQQHHH HHHAFDEEDE SAYSEVEEDH D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-125	C2H2 family protein