PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022971287.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Protein Properties

Length: 873aa MW: 96981.4 Da PI: 6.5826

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022971287.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	55.5	1.1e-17	292	391	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+k l+ sd+++ grlv+pk +ae++ ++++e+ ++++d +g++W +++++ +++s++yvl+ G ++ +L++gD+v+F++++ e++ XP_022971287.1 292 FEKMLSASDAGRIGRLVVPKACAEAYfpPISQPEGLPIRIQDIKGKEWVFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRMD-PEGK 384 89************************555566778***********99899999999.*******************876.7777 PP .EEEEE- CS B3 92 lvvkvfr 98 l +++++ XP_022971287.1 385 LIMGFRK 391 7777766 PP

Sequence ? help Back to Top
Protein Sequence Length: 873 aa Download sequence
MASRTCMNVS CGASSSTEWR KGWALRSGDF ATLCDKCGSA YEQSIFCDVF HLKDSGWREC 60 TSCGKNLHCG CIASKFLMEL HDSGGVNCIS CAKDLELHIT GTSEKLNGLG TPQVQNSGAL 120 QTLLVEDDNS DRIRLVQQGN KAEGNELRES LLLQSNDKTG SLVQMKHEEN ISLVKDVGYV 180 SSLEFNQVTT NGLNETAKQE ICKADNGTKF TYDSLAFGCG SRSRHLIPKP ARALFNVGLE 240 PNASMVSQVR VARPPAEGRG RNQLLPRYWP RITDQELQQI SGASNSTVVP LFEKMLSASD 300 AGRIGRLVVP KACAEAYFPP ISQPEGLPIR IQDIKGKEWV FQFRFWPNNN SRMYVLEGVT 360 PCIQSMQLQA GDTVTFSRMD PEGKLIMGFR KASSSSIMQD THPNALSTAG GHSSEFFSSV 420 FENLPMLSGH SSLLQSLKGN MDPHLNLLPG YFNQPGADMS WQKAEKHDDK SREGLLLSSM 480 LAPERKRTRN IGSKSKRLLV DCQDALELKL KWEEVQDLLR PPPTVKPSKF VIEDHEFEEY 540 EEPPVFGKRS IFLVRSNRGQ EQWAQCDDCS KWRKLPVDVL LPSKWTCVEN IWDQSMSSCS 600 TPEELTTREL EHILRLNKEF KRQRTLAFNR PIQDHESSGL DALANAATLG DNVSDPGTAS 660 VATTTRHPRH RPGCSCIVCI QPPSGKGKHK PTCTCNVCMT VKRRFKTLMM RKKKRQSERE 720 AEIAQKNQLK WGSRDETELD NTSRHVSLNL GPSENEAQLT NESRSRSNLV ETGKDQLDLN 780 CHPDQENEVQ GVSNRVSMMS LVQIASLPLE TYLKQNGLTS LLPEPQVSLA SSHAPAQGAN 840 EVEGAMNDDD GCFASSAQDQ ESEGEEICEK DQS

Sequence ? help Back to Top

Protein Sequence Length: 873 aa Download sequence

MASRTCMNVS CGASSSTEWR KGWALRSGDF ATLCDKCGSA YEQSIFCDVF HLKDSGWREC  60
TSCGKNLHCG CIASKFLMEL HDSGGVNCIS CAKDLELHIT GTSEKLNGLG TPQVQNSGAL  120
QTLLVEDDNS DRIRLVQQGN KAEGNELRES LLLQSNDKTG SLVQMKHEEN ISLVKDVGYV  180
SSLEFNQVTT NGLNETAKQE ICKADNGTKF TYDSLAFGCG SRSRHLIPKP ARALFNVGLE  240
PNASMVSQVR VARPPAEGRG RNQLLPRYWP RITDQELQQI SGASNSTVVP LFEKMLSASD  300
AGRIGRLVVP KACAEAYFPP ISQPEGLPIR IQDIKGKEWV FQFRFWPNNN SRMYVLEGVT  360
PCIQSMQLQA GDTVTFSRMD PEGKLIMGFR KASSSSIMQD THPNALSTAG GHSSEFFSSV  420
FENLPMLSGH SSLLQSLKGN MDPHLNLLPG YFNQPGADMS WQKAEKHDDK SREGLLLSSM  480
LAPERKRTRN IGSKSKRLLV DCQDALELKL KWEEVQDLLR PPPTVKPSKF VIEDHEFEEY  540
EEPPVFGKRS IFLVRSNRGQ EQWAQCDDCS KWRKLPVDVL LPSKWTCVEN IWDQSMSSCS  600
TPEELTTREL EHILRLNKEF KRQRTLAFNR PIQDHESSGL DALANAATLG DNVSDPGTAS  660
VATTTRHPRH RPGCSCIVCI QPPSGKGKHK PTCTCNVCMT VKRRFKTLMM RKKKRQSERE  720
AEIAQKNQLK WGSRDETELD NTSRHVSLNL GPSENEAQLT NESRSRSNLV ETGKDQLDLN  780
CHPDQENEVQ GVSNRVSMMS LVQIASLPLE TYLKQNGLTS LLPEPQVSLA SSHAPAQGAN  840
EVEGAMNDDD GCFASSAQDQ ESEGEEICEK DQS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	702	713	KRRFKTLMMRKK
2	702	715	KRRFKTLMMRKKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	0.0	B3 family protein