PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022971078.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C3H
Protein Properties Length: 262aa    MW: 29413.9 Da    PI: 9.1553
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022971078.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH26.61e-08117138426
                     ---SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   4 elCrffartGtCkyGdrCkFaHg 26 
                     + C++f++ G+Ck+G++C++ H+
  XP_022971078.1 117 KVCHYFSK-GYCKHGNTCRYVHD 138
                     68******.*************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MDNETTKIVY ERICKLEPEY GLKIVGYVML NTNEQDMIRL AFSPDGIIQC VINTAKSDLG  60
IPEVPIPYGR VSSSPSSRLF LPHQTFSDFA LQNQMQWLSL DSATPVRRSR RREFPVKVCH  120
YFSKGYCKHG NTCRYVHDVV EKEPRVVVLS GRALDKLEIE IVELLKSRGG LPILIAALPM  180
VYRERYGRSL LGDGYLSKTG LSLTRLLALL SRIRVLDGLH GKNSIILADD SPKRNEISEQ  240
SVRQNSSTLG CSSQNLAHSS AF