PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022971073.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NAC
Protein Properties Length: 270aa    MW: 30515.2 Da    PI: 9.2451
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022971073.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1064.5e-33401821128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkklelee.......vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tk 79 
                     lp+G+rF+Ptd+el+  +L+ kv  + ++l+        +i+   +i++++P++Lp  v+++    +fF++ +k+y+tg+rk+r+          
  XP_022971073.1  40 LPAGVRFDPTDQELL-LHLEGKVGCDAHKLHPlidefipTIQWEhGICYTHPQKLP-GVRKDGLVRHFFHRPSKAYTTGTRKRRKvhaddaegEG 132
                     799************.88****999884442233333333443347**********.566666788******************84666655444 PP

             NAM  80 sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                     + +W++tgk+++vl+  g+++g kk+Lv+y   g+++k+ekt+W+mh+y+l
  XP_022971073.1 133 ETRWHKTGKTRPVLV-AGRVKGYKKILVLYtnYGKQKKPEKTNWIMHQYHL 182
                     778************.999***********6658999************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MTQFVDKYVT NSSSSCPSCG HHQIKSPEKG GAGIHILPGL PAGVRFDPTD QELLLHLEGK  60
VGCDAHKLHP LIDEFIPTIQ WEHGICYTHP QKLPGVRKDG LVRHFFHRPS KAYTTGTRKR  120
RKVHADDAEG EGETRWHKTG KTRPVLVAGR VKGYKKILVL YTNYGKQKKP EKTNWIMHQY  180
HLGNSEEEKD GELVVSKVFY QTQPRQCGNS VKKDHNRHED SSSSYNNPNP LVDFYNPSFV  240
YFESSDQNRS ASNSHMIPQF AVHDGSSAVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28500.11e-113NAC family protein