PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022970951.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HD-ZIP
Protein Properties Length: 777aa    MW: 85265.6 Da    PI: 5.4456
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022970951.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox64.31.7e-20115171157
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 
                     +++ +++t++q++e+e++F+++++p+ ++r+eL+++lgL+  qVk+WFqN+R+++k+
  XP_022970951.1 115 KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKN 171
                     688999************************************************995 PP
2START221.52.7e-693055251206
                     HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
           START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                     ela +a++el ++a+++ep+W++s       +n+de+l++f+++ +     ++ ea+r+s+vv+m++ +lve+l+d++ qW++ +     +a+tl
  XP_022970951.1 305 ELAVAAMEELTRMAQLGEPLWMTSLdgstNVLNEDEYLRTFPRGIGpkpsgFKCEASRESAVVIMNHINLVEILMDVN-QWSTLFSgivsRAMTL 398
                     57899********************9999999***********999********************************.**************** PP

                     EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS
           START  83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170
                     ev+s+g      galq+m++e+q+lsplvp R++++vRy++q+ +g+w++vdvS+d  ++ p    + R++++pSg+li++++ng+skvtwvehv
  XP_022970951.1 399 EVLSTGvagnynGALQVMTSEFQVLSPLVPtRESYYVRYCKQHVDGTWAVVDVSLDDLRPTP----GLRCRRRPSGCLIQEMPNGYSKVTWVEHV 489
                     ************************************************************99....6**************************** PP

                     E--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 171 dlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     ++++r +h+l+++lv+sg+a+gak+wv tl+rqce+
  XP_022970951.1 490 EVDDRGVHSLYKQLVSSGQAFGAKRWVTTLDRQCER 525
                     **********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 777 aa     Download sequence    
MYISYGSVGF FVLCLISNMP AGITTPATNM SSIFGSNGNN VAGFYSSYEL VLPQKMFQPS  60
IFDDGKLLPL DMPQNTSDSD FARIRDDDFD SATKSGSDNN HELASGDDQD PRPKKKRYHR  120
HTQHQIQEME AFFKECPHPD DKQRKELSRE LGLEPLQVKF WFQNKRTQMK NQHERHENTQ  180
LRTENEKLRA DNMRYREALS NASCPNCGGP TAIGEMSFDE HHLRLENARL REEIDRISAI  240
AAKYVGKPVV NYPLLSPPVP SRPLELGMGN FGPQSGLGGD IYGSAGDLIR SISAPTEADK  300
PMIIELAVAA MEELTRMAQL GEPLWMTSLD GSTNVLNEDE YLRTFPRGIG PKPSGFKCEA  360
SRESAVVIMN HINLVEILMD VNQWSTLFSG IVSRAMTLEV LSTGVAGNYN GALQVMTSEF  420
QVLSPLVPTR ESYYVRYCKQ HVDGTWAVVD VSLDDLRPTP GLRCRRRPSG CLIQEMPNGY  480
SKVTWVEHVE VDDRGVHSLY KQLVSSGQAF GAKRWVTTLD RQCERLASAM ATNIPTGDVG  540
VITNQEGRKS MLKLAERMVI SFCAGVSAST THTWTTLSGT GADDVRVMTR KSIDDPGRPP  600
GIVLSAATSF WLPIPPKRIF DFLRDENSRS EWDILSNGGV VQEMAHIANG RDTGNCVSLL  660
RVNSANSSQS NMLILQESCT DPTASFVIYA PVDIVAMNVV LNGGDPDYVA LLPSGFAILP  720
DGTAETAAGG SLLTVAFQIL VDSVPTAKLS LGSVATVNNL IACTAERIKA SLSCETA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05230.40.0HD-ZIP family protein