PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022970950.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HD-ZIP
Protein Properties Length: 722aa    MW: 79422.9 Da    PI: 5.4413
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022970950.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox64.51.5e-2060116157
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 
                     +++ +++t++q++e+e++F+++++p+ ++r+eL+++lgL+  qVk+WFqN+R+++k+
  XP_022970950.1  60 KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKN 116
                     688999************************************************995 PP
2START221.72.4e-692504701206
                     HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
           START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                     ela +a++el ++a+++ep+W++s       +n+de+l++f+++ +     ++ ea+r+s+vv+m++ +lve+l+d++ qW++ +     +a+tl
  XP_022970950.1 250 ELAVAAMEELTRMAQLGEPLWMTSLdgstNVLNEDEYLRTFPRGIGpkpsgFKCEASRESAVVIMNHINLVEILMDVN-QWSTLFSgivsRAMTL 343
                     57899********************9999999***********999********************************.**************** PP

                     EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS
           START  83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170
                     ev+s+g      galq+m++e+q+lsplvp R++++vRy++q+ +g+w++vdvS+d  ++ p    + R++++pSg+li++++ng+skvtwvehv
  XP_022970950.1 344 EVLSTGvagnynGALQVMTSEFQVLSPLVPtRESYYVRYCKQHVDGTWAVVDVSLDDLRPTP----GLRCRRRPSGCLIQEMPNGYSKVTWVEHV 434
                     ************************************************************99....6**************************** PP

                     E--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 171 dlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     ++++r +h+l+++lv+sg+a+gak+wv tl+rqce+
  XP_022970950.1 435 EVDDRGVHSLYKQLVSSGQAFGAKRWVTTLDRQCER 470
                     **********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 722 aa     Download sequence    
MFQPSIFDDG KLLPLDMPQN TSDSDFARIR DDDFDSATKS GSDNNHELAS GDDQDPRPKK  60
KRYHRHTQHQ IQEMEAFFKE CPHPDDKQRK ELSRELGLEP LQVKFWFQNK RTQMKNQHER  120
HENTQLRTEN EKLRADNMRY REALSNASCP NCGGPTAIGE MSFDEHHLRL ENARLREEID  180
RISAIAAKYV GKPVVNYPLL SPPVPSRPLE LGMGNFGPQS GLGGDIYGSA GDLIRSISAP  240
TEADKPMIIE LAVAAMEELT RMAQLGEPLW MTSLDGSTNV LNEDEYLRTF PRGIGPKPSG  300
FKCEASRESA VVIMNHINLV EILMDVNQWS TLFSGIVSRA MTLEVLSTGV AGNYNGALQV  360
MTSEFQVLSP LVPTRESYYV RYCKQHVDGT WAVVDVSLDD LRPTPGLRCR RRPSGCLIQE  420
MPNGYSKVTW VEHVEVDDRG VHSLYKQLVS SGQAFGAKRW VTTLDRQCER LASAMATNIP  480
TGDVGVITNQ EGRKSMLKLA ERMVISFCAG VSASTTHTWT TLSGTGADDV RVMTRKSIDD  540
PGRPPGIVLS AATSFWLPIP PKRIFDFLRD ENSRSEWDIL SNGGVVQEMA HIANGRDTGN  600
CVSLLRVNSA NSSQSNMLIL QESCTDPTAS FVIYAPVDIV AMNVVLNGGD PDYVALLPSG  660
FAILPDGTAE TAAGGSLLTV AFQILVDSVP TAKLSLGSVA TVNNLIACTA ERIKASLSCE  720
TA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05230.40.0HD-ZIP family protein