PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022970743.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 245aa MW: 28135.6 Da PI: 6.5117

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022970743.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	46.6	8.1e-15	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W+ eEd++l +v+++G++ W+ ++ g+ R++k+c++rw++yl XP_022970743.1 14 RGAWSSEEDDKLMGYVQKHGPRKWRQVPCVPGLARCGKSCRLRWLNYL 61 89************************9999************97 PP
2	Myb_DNA-binding	50.7	4.1e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+ T eE +l+ ++++++G++ W+ Ia +++ Rt++++k++w+++l XP_022970743.1 67 KGNYTDEENDLICKLHEMHGNR-WSMIATKLP-ERTDNEIKNHWNTHL 112 7999****************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 245 aa Download sequence
MVRSPIVDKD GVKRGAWSSE EDDKLMGYVQ KHGPRKWRQV PCVPGLARCG KSCRLRWLNY 60 LRPGLKKGNY TDEENDLICK LHEMHGNRWS MIATKLPERT DNEIKNHWNT HLKKLKKQVE 120 RISEPSTQPK PKKLRPNIAS DLEAKTEEFT GYCSTKFGIV ESSSLSLQTS STSSDANFGR 180 LNWAVEEYDQ SGYGDLWNEP FIWDGDDVSY VLDGSMQFSP DNGMFSPQVH ETTYDDYIDL 240 FCSLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34990.1	2e-51	MYB family protein