PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022970429.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family LBD
Protein Properties Length: 190aa    MW: 20724.7 Da    PI: 7.8277
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022970429.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF2601201.3e-37361291100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +CaaCk+lrr+C+++Cvlapyfp ++p kf ++h++FGasn++kll++       da+sslvyeA ar+rdPvyG++g i++lq+q+++l+aela
  XP_022970429.1  36 PCAACKTLRRRCTEKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLQR------IDAVSSLVYEASARIRDPVYGCAGAISQLQKQINELQAELA 124
                     7*********************************************86......89*************************************** PP

          DUF260  96 llkee 100
                     ++++e
  XP_022970429.1 125 KTQAE 129
                     *9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MDAKSSPTST IFRSQSPSSS PLPPPPSVQA GLVVSPCAAC KTLRRRCTEK CVLAPYFPPS  60
DPLKFTIAHR IFGASNIIKL LQRIDAVSSL VYEASARIRD PVYGCAGAIS QLQKQINELQ  120
AELAKTQAEL VNIHSHQTNL VALICKELAQ TPPPVSPPDH HALDNNLNTA IPQSYTNLFE  180
DSSIWEPLWT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07900.11e-61LBD family protein