PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022970073.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family B3
Protein Properties Length: 313aa    MW: 35067.2 Da    PI: 6.5182
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022970073.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B397.58.3e-3154158199
                     EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.se 89 
                     f kv tpsdv+k++rlv+pk++ae++    ++ + ++  l +ed++g+sW+++++y+++s++yv+tkGW++Fvk+++L++gD+v F++  g+  +
  XP_022970073.1  54 FNKVVTPSDVGKLNRLVIPKQHAERFfpldSSTNDKGLLLNFEDRNGKSWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFQRGvGEiGR 148
                     89***************************9555568889************************************************65577777 PP

                     E..EEEEE-S CS
              B3  90 felvvkvfrk 99 
                      +l++  +r+
  XP_022970073.1 149 DRLYIDCRRR 158
                     7777777765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MNFGLNRLQN HDLEPRNRLD LTMLEPPEPE EEAASSTAVG SDGGDGGVEK EHMFNKVVTP  60
SDVGKLNRLV IPKQHAERFF PLDSSTNDKG LLLNFEDRNG KSWRFRYSYW NSSQSYVMTK  120
GWSRFVKEKR LDAGDTVSFQ RGVGEIGRDR LYIDCRRRHE LPIHHHSPTT VSIRPSIVVP  180
ASATAWGPFM WQPLSATTPG YLPHLRDPTS NRECCPYSDG SVETSGMMFL RTEGRRVAPR  240
LGDQREVEVE PSGGGGGSMT AVQDTPVKRS RLRLFGVNME MEDPISLTSD ECELLLFSSN  300
SNPKLASSSS NYE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46870.12e-66B3 family protein