PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022970054.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 380aa MW: 43932.4 Da PI: 6.9604

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022970054.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	164.8	3.2e-51	16	144	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPt+eel+++yL+kkv+ +k++l +vi++vd++k+ePwd+++k+k +++wyfFs++dkky+tg+r+nrat+ g+Wkatg+dk + XP_022970054.1 16 VPPGFRFHPTEEELLHYYLRKKVAFQKIDL-DVIRDVDLNKLEPWDIQEKCKIgstPQNDWYFFSHKDKKYPTGTRTNRATAVGFWKATGRDKII 109 69**************************.9***********964444222455********************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +++ +gl+ktLvfykgrap+g+k+dW+mheyrl XP_022970054.1 110 YT-GSKRIGLRKTLVFYKGRAPHGQKSDWIMHEYRL 144 9.999***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MAEHDMTLSV NGHSQVPPGF RFHPTEEELL HYYLRKKVAF QKIDLDVIRD VDLNKLEPWD 60 IQEKCKIGST PQNDWYFFSH KDKKYPTGTR TNRATAVGFW KATGRDKIIY TGSKRIGLRK 120 TLVFYKGRAP HGQKSDWIMH EYRLDDCDRD NNICNSIGEP QVSEDGWVVC RIFKKKSYQK 180 CVDSPKAGGS DSEVRLLNAN NDGVLDQILN YMGRTCKLEM ESFSNINYNN QSSRLILNSK 240 NNIEDQQQKV DKSFMHLPRL DSPTTVPSIV SHHQLETTPF DYNIIFNHEM LLEPTEPMPE 300 LVHDRPMVKL DNWVALDRLV ASQLNGHNER SIEDREHEQQ HHHHMQVSSR GLGYGHENDI 360 WGFTKSASPS SLDPLSHFSV

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MAEHDMTLSV NGHSQVPPGF RFHPTEEELL HYYLRKKVAF QKIDLDVIRD VDLNKLEPWD  60
IQEKCKIGST PQNDWYFFSH KDKKYPTGTR TNRATAVGFW KATGRDKIIY TGSKRIGLRK  120
TLVFYKGRAP HGQKSDWIMH EYRLDDCDRD NNICNSIGEP QVSEDGWVVC RIFKKKSYQK  180
CVDSPKAGGS DSEVRLLNAN NDGVLDQILN YMGRTCKLEM ESFSNINYNN QSSRLILNSK  240
NNIEDQQQKV DKSFMHLPRL DSPTTVPSIV SHHQLETTPF DYNIIFNHEM LLEPTEPMPE  300
LVHDRPMVKL DNWVALDRLV ASQLNGHNER SIEDREHEQQ HHHHMQVSSR GLGYGHENDI  360
WGFTKSASPS SLDPLSHFSV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32770.1	1e-114	NAC family protein