PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022969948.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 211aa MW: 24240.1 Da PI: 9.7534 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 98.5 | 2.6e-31 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien++ rqvtfskRrngilKKA+ELSvLCdaev+viifs++g+lye+ss XP_022969948.1 9 KRIENSTSRQVTFSKRRNGILKKAYELSVLCDAEVSVIIFSQRGRLYEFSS 59 79***********************************************96 PP | |||||||
2 | K-box | 56.4 | 1.3e-19 | 82 | 171 | 9 | 98 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 ++e +++++qe++ k+ie+L+++q++llG +L+s+s++e +++e+qL sl++iR++K l++eq e+l +k k l eenk+L++k XP_022969948.1 82 QSEGYMQQMKQEAEMTAKKIEELEKSQKKLLGRGLDSCSFEEVREIEKQLILSLTRIRERKALLFKEQKEKLIEKGKLLIEENKKLSAKC 171 677789********************************************************************************9985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence |
MVRGKVEMKR IENSTSRQVT FSKRRNGILK KAYELSVLCD AEVSVIIFSQ RGRLYEFSSS 60 IMQKTIERYR KFGKGGETNT FQSEGYMQQM KQEAEMTAKK IEELEKSQKK LLGRGLDSCS 120 FEEVREIEKQ LILSLTRIRE RKALLFKEQK EKLIEKGKLL IEENKKLSAK CGTKPWEQEG 180 IEAEGGIMSL CSQSRQGSDI QTELFIGLSC S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62165.3 | 9e-69 | MIKC_MADS family protein |