PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022969618.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 614aa MW: 66320.1 Da PI: 6.2361

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022969618.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	46.4	7.2e-15	381	427	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P++ K++Ka++L + +eY+k Lq XP_022969618.1 381 VHNLSERRRRDRINEKMRALQELIPNC-----NKVDKASMLDEGIEYLKTLQ 427 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 614 aa Download sequence
MPLSELYRVA RGKNNMVSAD SSLNPENDVY ELVWENGQIL LQGQSSKARK NSCVPFHSPK 60 GTDSVIRDVL GHDDDDDDDM VPWLNYPLDE HSSEFLLELS GVTVNDPLSR NSSSKQVDGD 120 AQLNHLHGAR LEDGNISKLS SMDVSSARAR SCTNQLHSSA SQQSQISLPH RSSSSTARHN 180 SSNIMNFSHF LRPAVLKSND QNRDVTKAVG LSSMRCVGSM DKNCSAGNTQ PYESSFFKTR 240 GSIRNESKSC CENAVVPSID DSNPSDVKAP ETLEVVEQPE VACLGDSAKN DDRPEPCLEA 300 GASKGLSDSE KVVESVIAAS VCSRTSMKRA LDDTTVLRKR KCHDNEDSEW HSDDVEEESN 360 DMKRATPARG NGSKRSRAAE VHNLSERRRR DRINEKMRAL QELIPNCNKV DKASMLDEGI 420 EYLKTLQLQV QIMSMGAGLF MPPMMFPGGM PPMNAPHIYS PMGVGIGMGF GIAMPDMNGG 480 SPGYPMAQMP HLQGTHFPSP SIPAQTIMHG MPGSNFHVLG FPGQGLPVSM PRGPIAPFHG 540 GPFMTNSSVA VAPVESFSLA AACSSKDSPP KMNSPTVRNG GNDPLITAPR QGNKQASGVN 600 GSGTNPTNNN ETTL

Sequence ? help Back to Top

Protein Sequence Length: 614 aa Download sequence

MPLSELYRVA RGKNNMVSAD SSLNPENDVY ELVWENGQIL LQGQSSKARK NSCVPFHSPK  60
GTDSVIRDVL GHDDDDDDDM VPWLNYPLDE HSSEFLLELS GVTVNDPLSR NSSSKQVDGD  120
AQLNHLHGAR LEDGNISKLS SMDVSSARAR SCTNQLHSSA SQQSQISLPH RSSSSTARHN  180
SSNIMNFSHF LRPAVLKSND QNRDVTKAVG LSSMRCVGSM DKNCSAGNTQ PYESSFFKTR  240
GSIRNESKSC CENAVVPSID DSNPSDVKAP ETLEVVEQPE VACLGDSAKN DDRPEPCLEA  300
GASKGLSDSE KVVESVIAAS VCSRTSMKRA LDDTTVLRKR KCHDNEDSEW HSDDVEEESN  360
DMKRATPARG NGSKRSRAAE VHNLSERRRR DRINEKMRAL QELIPNCNKV DKASMLDEGI  420
EYLKTLQLQV QIMSMGAGLF MPPMMFPGGM PPMNAPHIYS PMGVGIGMGF GIAMPDMNGG  480
SPGYPMAQMP HLQGTHFPSP SIPAQTIMHG MPGSNFHVLG FPGQGLPVSM PRGPIAPFHG  540
GPFMTNSSVA VAPVESFSLA AACSSKDSPP KMNSPTVRNG GNDPLITAPR QGNKQASGVN  600
GSGTNPTNNN ETTL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	386	391	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09530.2	4e-52	bHLH family protein