PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022969390.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NAC
Protein Properties Length: 314aa    MW: 35999.6 Da    PI: 7.9529
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022969390.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM174.33.5e-54111411129
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                     +ppGfrFhPtdeel+ +yL+kkv+ + +el +vi+evd++k+ePwdL+ k ++ + +++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk +
  XP_022969390.1  11 VPPGFRFHPTDEELLYYYLRKKVSYEAIEL-DVIREVDLNKLEPWDLKdKcRIGSgQQNEWYFFSHKDKKYPTGTRTNRATSAGFWKATGRDKGI 104
                     69****************************.9***************843444443666************************************ PP

             NAM  93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129
                     + ++++ +g++ktLvfy+grap+g+ktdW+mheyrle
  XP_022969390.1 105 HMANSKRIGMRKTLVFYTGRAPHGQKTDWIMHEYRLE 141
                     ***********************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MMPENGQHFS VPPGFRFHPT DEELLYYYLR KKVSYEAIEL DVIREVDLNK LEPWDLKDKC  60
RIGSGQQNEW YFFSHKDKKY PTGTRTNRAT SAGFWKATGR DKGIHMANSK RIGMRKTLVF  120
YTGRAPHGQK TDWIMHEYRL EDHDPEIQTQ EDGWVVCRVF KKKSQKAEGL EYHAHTKVEG  180
SSSGSAALMG AEIGEPKSNN HTQQPYNEYG FDGCMQLPQL FSPDSAVATP ISVECPQNMW  240
RLNCGGVQQE RLNTDWSFLS RLLASDHQSR TKSALPDQLS VGHPNSTMFS FPFPFPFPYP  300
YPLPSAADLF KFSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79580.11e-104NAC family protein