PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022969351.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family BBR-BPC
Protein Properties Length: 314aa    MW: 35064.7 Da    PI: 10.1509
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022969351.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind364.52.1e-11113141301
       GAGA_bind   1 mdddgsre..rnkg.yye..............pa.aslkenlglqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalver 77 
                     mdd  ++e  r+k  y++              ++ ++l   +++++ms+iaerda+irernlalsekk+a+a+rd+a++qrd+a+a+r+ al+er
  XP_022969351.1   1 MDDGRHHEngRHKLdYFRgspspwhmapphhvKEpNALV--MNKKIMSIIAERDAAIRERNLALSEKKGALAARDEALQQRDEAIAQRDSALMER 93 
                     777766666888887888999999999876663335666..99**************************************************** PP

       GAGA_bind  78 dnkllalllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkk..kkk 170
                     dn+l+al+ ++n+  s+ p g ++ ++tk +++l + + p ++++++++++ ++++a+pi+  a+ea ++++ +++ + +k+ ++k++k   kk 
  XP_022969351.1  94 DNALAALEIRDNA--SNFPLGNGIQRKTKRLHHLSN-HMPSMSETPYGTKDVHITDAFPITVIASEAVKSRQGNRTTTDNKAVSSKTSKLprKKV 185
                     *********9998..77899999*********9998.77****************************9999999888888888888776511344 PP

       GAGA_bind 171 sekskkkvkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgaf 265
                     +e+ +++ ++++  ++ +++++ +d++ln vs+D+s++P+P+CsCtG  rqCYkWGnGGWqS+CCtt +S+yPLP ++++r+ R++grKmS+++f
  XP_022969351.1 186 GEDLNRQAATDG--TKYRTDWDGQDVGLNLVSFDDSSMPAPICSCTGLARQCYKWGNGGWQSSCCTTHMSMYPLPHMPNKRHVRMGGRKMSGSVF 278
                     445555555444..78******************************************************************************* PP

       GAGA_bind 266 kklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                     +klL++Laa G+dls pvDLkdhWA+HGtn+++tir
  XP_022969351.1 279 TKLLSRLAAAGHDLSVPVDLKDHWARHGTNRYITIR 314
                     ***********************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MDDGRHHENG RHKLDYFRGS PSPWHMAPPH HVKEPNALVM NKKIMSIIAE RDAAIRERNL  60
ALSEKKGALA ARDEALQQRD EAIAQRDSAL MERDNALAAL EIRDNASNFP LGNGIQRKTK  120
RLHHLSNHMP SMSETPYGTK DVHITDAFPI TVIASEAVKS RQGNRTTTDN KAVSSKTSKL  180
PRKKVGEDLN RQAATDGTKY RTDWDGQDVG LNLVSFDDSS MPAPICSCTG LARQCYKWGN  240
GGWQSSCCTT HMSMYPLPHM PNKRHVRMGG RKMSGSVFTK LLSRLAAAGH DLSVPVDLKD  300
HWARHGTNRY ITIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G21240.11e-133BBR-BPC family protein