PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022969164.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 336aa    MW: 37588.1 Da    PI: 5.4204
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022969164.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding605.1e-191461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd++lv +v+ +G+g+W+  ++  g++R++k+c++rw +yl
   XP_022969164.1 14 KGPWTPEEDQKLVSYVQIHGPGNWRNLPKNAGLRRCGKSCRLRWTNYL 61
                     79********************************************97 PP
2Myb_DNA-binding49.78.6e-1667111147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rgr+  eE+e +++++  lG++ W++Ia++++ gRt++++k++w+++
   XP_022969164.1  67 RGRFAFEEEETIIQLHSVLGNK-WSAIAARLP-GRTDNEIKNYWNTH 111
                      899999****************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MGRAPCCDKN GLKKGPWTPE EDQKLVSYVQ IHGPGNWRNL PKNAGLRRCG KSCRLRWTNY  60
LRPDIKRGRF AFEEEETIIQ LHSVLGNKWS AIAARLPGRT DNEIKNYWNT HIRKRLLRMG  120
IDPVTHTPRI DLLDLPSILT AAICSHPLLS LSTLLNNNQA AGLNSESVRL MSTLLAIRQE  180
DPNDNRFLLQ AQAQAQLQAQ MDTLSQLLQP NDNVNNANAS SMPISRFVEC PNSQENLNFL  240
PSNLSGEDVL VNQPNYVYGE NGSNPTASNL PETWNDDVQN LGFDCVISTP KSSPTPLNSS  300
STCVNNSSSN EDERDSYCSN FFQFEIPEGL DFADLM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21440.14e-95MYB family protein