PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022969147.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C3H
Protein Properties Length: 363aa    MW: 40003.6 Da    PI: 6.4939
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022969147.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH18.73.1e-06115135526
                     --SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                      C++f+r G C +Gd C FaHg
  XP_022969147.1 115 MCPDFRR-GGCDRGDGCEFAHG 135
                     6******.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    
MSSVCAEEQK FQFQFQLPSS CSSILEDING EMCSDSPRFS FAVESLLQKF LPFNGEDVAE  60
EDGDPYSSDH FRMYEFKVWR CTRSRSHDWT DCPFAHPGEK ARRRDPRRFH YSGTMCPDFR  120
RGGCDRGDGC EFAHGVFECW LHPARYRTEA CKDGKNCKRK VCFFAHSPRE LRLLPPMSNF  180
QGGSCSSPNK RNSTLRSAAA GSNHGCLFCH CGGAATSSPT STLIGMSHLS PPLSPPLSPV  240
KPQSLNGFSP ISRYNPDPSK LNGVISYKDS MTELMNSIES MNIDELNATL AASASRQTIP  300
WIDVSSLNTE EQLQFVLSPS TPNVSAASVN FSVNNKGNAD NGWASASASA SDPDLGWVND  360
LLM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03790.12e-74C3H family protein