PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022969100.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C3H
Protein Properties Length: 434aa    MW: 49242.4 Da    PI: 8.0914
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022969100.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH19.51.8e-06831126
                    --S---SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH  1 yktelCrffartGtCkyGdrCkFaHg 26
                    +kt+lC  +++ G+C++ ++C+FaHg
  XP_022969100.1  8 FKTKLCVLYQK-GHCSR-PSCSFAHG 31
                    69*********.*****.*******8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 434 aa     Download sequence    
MMIGRKLFKT KLCVLYQKGH CSRPSCSFAH GNAELRRFAG ASSGRQEYRE NDLRHKLDSR  60
HSPLQERDSR GRHGPQYSSS WSLERNSDHK RRKKDHGDSR TDYAGNLRII DRSEERDREG  120
KISSSSRDTL EEQLNKMQAD IEMAEHHRHQ AEVYLEEKIQ EVDSLTSRIQ ELESQLYNER  180
EECRRIKSKI KKFVKAHNRY SGIQDELKRS QFRLQQLGDQ LGSDVNKIGA NEEDSSVNIV  240
SDGEDPSYHA AGPLHHLHKD TSASKRKLHV DQDIAANSKR ADLHKGSKEA VGRLRRISRW  300
NAHPAKSVYS KIEAIRNENN DYIPKANESR QKRGKASNSV STADKVRSLD AGVVVPLTSM  360
AAHAVNEEVD IELEVNNEVS DRRESTKEAA SGSVPLLPPP PSPIHKINHS RYEGEDQNID  420
VEVVDDESAG LDNA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21810.13e-52C3H family protein