PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022969099.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C3H
Protein Properties Length: 435aa    MW: 49399.6 Da    PI: 8.0914
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022969099.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH19.51.8e-06831126
                    --S---SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH  1 yktelCrffartGtCkyGdrCkFaHg 26
                    +kt+lC  +++ G+C++ ++C+FaHg
  XP_022969099.1  8 FKTKLCVLYQK-GHCSR-PSCSFAHG 31
                    69*********.*****.*******8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 435 aa     Download sequence    
MMIGRKLFKT KLCVLYQKGH CSRPSCSFAH GNAELRRFAG ASSGRQEYRE NDLRHKLDSR  60
HSPLQERDSR GRHGPREYSS SWSLERNSDH KRRKKDHGDS RTDYAGNLRI IDRSEERDRE  120
GKISSSSRDT LEEQLNKMQA DIEMAEHHRH QAEVYLEEKI QEVDSLTSRI QELESQLYNE  180
REECRRIKSK IKKFVKAHNR YSGIQDELKR SQFRLQQLGD QLGSDVNKIG ANEEDSSVNI  240
VSDGEDPSYH AAGPLHHLHK DTSASKRKLH VDQDIAANSK RADLHKGSKE AVGRLRRISR  300
WNAHPAKSVY SKIEAIRNEN NDYIPKANES RQKRGKASNS VSTADKVRSL DAGVVVPLTS  360
MAAHAVNEEV DIELEVNNEV SDRRESTKEA ASGSVPLLPP PPSPIHKINH SRYEGEDQNI  420
DVEVVDDESA GLDNA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21810.11e-51C3H family protein