PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022968990.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 765aa MW: 83094.9 Da PI: 5.8481 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 61.7 | 1.1e-19 | 90 | 145 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++ +++t++q++++e++F+++++p+ ++r+eL+++lgL+ qVk+WFqN+R+++k XP_022968990.1 90 KKRYHRHTQNQIQQMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 145 688999***********************************************999 PP | |||||||
2 | START | 222.7 | 1.1e-69 | 283 | 503 | 1 | 206 |
HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS START 1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 ela +a++elv++a+ +ep+W++ +n+de++++f+++ + +s ea+ra++vv+m++ lve l+d++ qW++ + +a+tl XP_022968990.1 283 ELAVAAMEELVRMAQMGEPLWMTALdgstAVLNEDEYVRTFPRGIGpkpsgFSCEASRATAVVIMNHISLVEMLMDVN-QWSTVFSgivsRAMTL 376 57899********************9998899***********999********************************.**************** PP EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS START 83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170 ev+s+g galq+m++elq++splvp R+++fvRy++q+g+g+w++vdvS+d+ ++ p R++++pSg+li++++ng+skvtwvehv XP_022968990.1 377 EVLSTGvagnynGALQVMTSELQVPSPLVPtRESYFVRYCKQHGEGTWAVVDVSLDNLRPTPA----LRCRRRPSGCLIQDMPNGYSKVTWVEHV 467 ************************************************************995....**************************** PP E--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS START 171 dlkgrlphwllrslvksglaegaktwvatlqrqcek 206 ++++r +h+l+++lv+sg+a+gak+w atl+rqce+ XP_022968990.1 468 EVDDRGVHSLYNQLVRSGHAFGAKRWIATLDRQCER 503 **********************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 765 aa Download sequence |
MPAGMMIPAR NTAPMIGRNG NVGIFGSPAS LLLGQGNIME GGGQVEGVEF SESDFGRMRE 60 GEEFESATKS SSENQEVGSG DDLDHQRPKK KRYHRHTQNQ IQQMEAFFKE CPHPDDKQRK 120 ELSRELGLEP LQVKFWFQNK RTQMKTHHER HENTQLRTEN EKLRADNMRY REALGNATCP 180 NCGGPTAIGE MSFDEHHLRL ENVRLREEID RISAIAAKYV GKPVSSYPLL STPMTSSPLE 240 LGIGSYGGHN SGLGAGCGDM YGAVDLLRTI SAPSEADKPI IIELAVAAME ELVRMAQMGE 300 PLWMTALDGS TAVLNEDEYV RTFPRGIGPK PSGFSCEASR ATAVVIMNHI SLVEMLMDVN 360 QWSTVFSGIV SRAMTLEVLS TGVAGNYNGA LQVMTSELQV PSPLVPTRES YFVRYCKQHG 420 EGTWAVVDVS LDNLRPTPAL RCRRRPSGCL IQDMPNGYSK VTWVEHVEVD DRGVHSLYNQ 480 LVRSGHAFGA KRWIATLDRQ CERLASAMAT SIPTGDAGVI TNQEGRKSML KLAERMVMSF 540 CGGVSASTTH TWTTLSGTGA DDVRVMTRKS VDDPGRPPGI VLSAATSFWL PVPPKRVFDF 600 LRDENSRNEW DILSNGGIVQ EMAHIANGRD TGNCVSLLRV NSANSSQSNM LILQESSTDQ 660 TASFVVYAPV DIVAINVVLN GGDPDYVALL PSGFAILPDG STTSDGGANG VAEHGSGGSL 720 LTVAFQILVD SVPTAKLSLG SVATVNNLIA CTVERIKASL SCENQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G05230.4 | 0.0 | HD-ZIP family protein |