PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022968990.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HD-ZIP
Protein Properties Length: 765aa    MW: 83094.9 Da    PI: 5.8481
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022968990.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox61.71.1e-1990145156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t++q++++e++F+++++p+ ++r+eL+++lgL+  qVk+WFqN+R+++k
  XP_022968990.1  90 KKRYHRHTQNQIQQMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 145
                     688999***********************************************999 PP
2START222.71.1e-692835031206
                     HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
           START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                     ela +a++elv++a+ +ep+W++        +n+de++++f+++ +     +s ea+ra++vv+m++  lve l+d++ qW++ +     +a+tl
  XP_022968990.1 283 ELAVAAMEELVRMAQMGEPLWMTALdgstAVLNEDEYVRTFPRGIGpkpsgFSCEASRATAVVIMNHISLVEMLMDVN-QWSTVFSgivsRAMTL 376
                     57899********************9998899***********999********************************.**************** PP

                     EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS
           START  83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170
                     ev+s+g      galq+m++elq++splvp R+++fvRy++q+g+g+w++vdvS+d+ ++ p      R++++pSg+li++++ng+skvtwvehv
  XP_022968990.1 377 EVLSTGvagnynGALQVMTSELQVPSPLVPtRESYFVRYCKQHGEGTWAVVDVSLDNLRPTPA----LRCRRRPSGCLIQDMPNGYSKVTWVEHV 467
                     ************************************************************995....**************************** PP

                     E--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 171 dlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     ++++r +h+l+++lv+sg+a+gak+w atl+rqce+
  XP_022968990.1 468 EVDDRGVHSLYNQLVRSGHAFGAKRWIATLDRQCER 503
                     **********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 765 aa     Download sequence    
MPAGMMIPAR NTAPMIGRNG NVGIFGSPAS LLLGQGNIME GGGQVEGVEF SESDFGRMRE  60
GEEFESATKS SSENQEVGSG DDLDHQRPKK KRYHRHTQNQ IQQMEAFFKE CPHPDDKQRK  120
ELSRELGLEP LQVKFWFQNK RTQMKTHHER HENTQLRTEN EKLRADNMRY REALGNATCP  180
NCGGPTAIGE MSFDEHHLRL ENVRLREEID RISAIAAKYV GKPVSSYPLL STPMTSSPLE  240
LGIGSYGGHN SGLGAGCGDM YGAVDLLRTI SAPSEADKPI IIELAVAAME ELVRMAQMGE  300
PLWMTALDGS TAVLNEDEYV RTFPRGIGPK PSGFSCEASR ATAVVIMNHI SLVEMLMDVN  360
QWSTVFSGIV SRAMTLEVLS TGVAGNYNGA LQVMTSELQV PSPLVPTRES YFVRYCKQHG  420
EGTWAVVDVS LDNLRPTPAL RCRRRPSGCL IQDMPNGYSK VTWVEHVEVD DRGVHSLYNQ  480
LVRSGHAFGA KRWIATLDRQ CERLASAMAT SIPTGDAGVI TNQEGRKSML KLAERMVMSF  540
CGGVSASTTH TWTTLSGTGA DDVRVMTRKS VDDPGRPPGI VLSAATSFWL PVPPKRVFDF  600
LRDENSRNEW DILSNGGIVQ EMAHIANGRD TGNCVSLLRV NSANSSQSNM LILQESSTDQ  660
TASFVVYAPV DIVAINVVLN GGDPDYVALL PSGFAILPDG STTSDGGANG VAEHGSGGSL  720
LTVAFQILVD SVPTAKLSLG SVATVNNLIA CTVERIKASL SCENQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05230.40.0HD-ZIP family protein