PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022968541.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB_related | ||||||||
Protein Properties | Length: 318aa MW: 35640.8 Da PI: 7.9579 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 39.5 | 1.3e-12 | 30 | 74 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT+ E++++++a++++ + Wk+I + +g +t q++s+ qky XP_022968541.1 30 RESWTEPEHDKFLEAIQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 74 789*****************77.*********.*************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 318 aa Download sequence |
MALPFNAAPT SSKEDLSKRA RKPYTITKCR ESWTEPEHDK FLEAIQLFDR DWKKIEAFVG 60 SKTVIQIRSH AQKYFLKVEK SGTGEHLPPP RPKRKAAHPY PQKASKIDLA LVSLPLQPPS 120 VEPECITKPD SSSVPVSFVS AAAMPSRADH SIQTANFSQT ARGEVKQNNC SITRTRFPTK 180 SSSIEENNSL PLRVLPDFGQ VYNFIGSVFD PTAIDHLQRL KKMDQIDVET VLLLMRNLAI 240 NLSSPDFEDH KRVLSSYDAF MEHGLVLLLN IFAHWPLLLV EQEGRGGIDG HSAHLSTTCF 300 PSICIVLSFD IETMVYPS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52660.1 | 9e-85 | MYB_related family protein |