PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022968414.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 751aa MW: 83814.4 Da PI: 5.8613 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 67.4 | 1.8e-21 | 55 | 110 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 r+k +++t++q++eLe +F+++++p+ ++r eL+++lgL+ +qVk+WFqNrR+++k XP_022968414.1 55 RKKYHRHTPHQIQELEIFFKECPHPDDKQRSELSRRLGLESKQVKFWFQNRRTQMK 110 7999*************************************************999 PP | |||||||
2 | START | 166.3 | 2.2e-52 | 265 | 485 | 2 | 205 |
HHHHHHHHHHHHHHHC-TT-EEEE.....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS START 2 laeeaaqelvkkalaeepgWvkss.....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 la++a++elvk a+ + p+W +s+ e +n de+ ++f++s + ++ea r++++v+ +++ l e+l+d + +W e+++ +a+t+ XP_022968414.1 265 LALAAMDELVKVAQIDTPLWIRSRdssgkETLNFDEYSRTFPSSAAmkhtnWTTEATRDTTMVIINSMALIETLMDAN-RWAEMFPcliaRATTI 358 6899***********************9999**********99888*99999**************************.**************** PP EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS START 83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170 +vis+g g lqlm ael +lsplvp R f+R+++q+ +g w++vdvS+ + ++ + +++lpSg+++++++ng skvtwveh+ XP_022968414.1 359 DVISNGmggtrnGSLQLMHAELRVLSPLVPvRTLKFLRFCKQHADGLWAVVDVSLGEGADAD---MFFSCRRLPSGCIVQDMPNGFSKVTWVEHT 450 ************************************************************87...5***************************** PP E--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXX CS START 171 dlkgrlphwllrslvksglaegaktwvatlqrqce 205 ++++ ++h+l+r++++ g+ +g ++w+atlqrqc XP_022968414.1 451 EYDETVVHQLYRQIISWGIGFGSQRWLATLQRQCD 485 *********************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 751 aa Download sequence |
MDGYREACLL GDSFDPNGVV RMREDEYDSR SGSDNIDGAV SGDDQDANNE QRRKRKKYHR 60 HTPHQIQELE IFFKECPHPD DKQRSELSRR LGLESKQVKF WFQNRRTQMK TQIERHENAI 120 LKHENDKLRA ENSVMKDAIS NPTCNTCGGP SIPVHLSFEE HQLRIDNARL RDELHRLYTV 180 TNKFLGWPVL PFVNHSSSVS SDSCLELSVG RNGMGNLSNI SDPMPMGLNL GNGLFNGDPV 240 MPISKSQMGM PGNDIPIDRT IYVDLALAAM DELVKVAQID TPLWIRSRDS SGKETLNFDE 300 YSRTFPSSAA MKHTNWTTEA TRDTTMVIIN SMALIETLMD ANRWAEMFPC LIARATTIDV 360 ISNGMGGTRN GSLQLMHAEL RVLSPLVPVR TLKFLRFCKQ HADGLWAVVD VSLGEGADAD 420 MFFSCRRLPS GCIVQDMPNG FSKVTWVEHT EYDETVVHQL YRQIISWGIG FGSQRWLATL 480 QRQCDCLAIL MSSTEDPAGI SPHGRRSMLK LSQRMVDNFC SGICTSTLHK WDKLVVGNIS 540 EDVKMMARNS INDPGEPPGI VLSASTSVWM PVTQQRLFAF LQDECLRSEW DILSNGRPMI 600 EMLCISKGQG LDNRVSLLRA NPMNANENTM LILQESWTDI SGSLVVYAPV DTASVNLVMR 660 GEDSAYVSLL PSGFAILPDG PSNYACTNND KDGSIMSDIN SGYASGCLLT VAFQILVNNL 720 PTAKLTVESV ETVNNLISCT IQKIKVALRV L |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 53 | 57 | RKRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00730.1 | 0.0 | HD-ZIP family protein |